Fitness for 5 genes in Burkholderia phytofirmans PsJN

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	BPHYT_RS02040	BPHYT_RS02045	BPHYT_RS02050	BPHYT_RS02055	BPHYT_RS02060
carbon source	D-Mannose (C)	-0.1	-6.8	-5.4	N.D.	-0.4
carbon source	D-Sorbitol (C)	+0.3	-7.6	-2.9	N.D.	-0.2
carbon source	D-Fructose (C)	+0.3	-5.1	-3.1	N.D.	-0.1
carbon source	D-Fructose (C)	+0.3	-4.6	-2.5	N.D.	+0.2
carbon source	D-Fructose (C)	+0.2	-4.6	-2.1	N.D.	-0.1
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-1.0	-4.1	-1.2	N.D.	+0.2
in planta	Plant=Zea_mays; PlantTreatment=None; sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=15_days	+0.1	-4.8	-1.3	N.D.	-0.1
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.7	-3.5	-1.2	N.D.	+0.3
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.5	-3.8	-1.1	N.D.	+0.3
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.5	-3.1	-1.2	N.D.	-0.1
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.1	-3.4	-1.1	N.D.	-0.1
in planta	Plant=Brachypodium_distachyon ; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	+0.0	-3.6	-0.5	N.D.	-0.4
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.4	-3.4	-0.8	N.D.	+0.4
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.3	-2.5	-1.3	N.D.	-0.1
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.6	-2.4	-1.2	N.D.	+0.1
in planta	Plant=Brachypodium_distachyon ; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.2	-3.4	-0.5	N.D.	-0.1
carbon source	D-Fructose (C)	-0.3	-2.0	-1.3	N.D.	-0.1
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.3	-2.3	-1.2	N.D.	+0.1
carbon source	D-Fructose (C)	-0.1	-2.4	-1.2	N.D.	+0.2
in planta	Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_0.8%agar; Collection=outgrowth_LB; Time=7_days	-0.8	-2.0	-0.4	N.D.	-0.1
in planta	Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days	-0.7	-2.0	-0.4	N.D.	+0.0
in planta	Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days	+0.0	-1.7	-1.1	N.D.	+0.2
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.7	-1.5	-0.1	N.D.	-0.3
phage	36hr PHYTO7 MOI 1	-1.3	-0.9	+0.1	N.D.	-0.5
in planta	Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days	+0.1	-2.1	-0.2	N.D.	-0.3
in planta	Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days	-0.3	-1.6	-0.5	N.D.	+0.1
phage	36hr PHYTO11 MOI 0.1	-1.1	-0.5	+0.2	N.D.	-0.8
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-1.5	-1.0	+0.1	N.D.	+0.2
in planta	Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.6	-1.6	+0.5	N.D.	-0.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-1.0	+1.4	-0.3	N.D.	+0.0