Fitness for 5 genes in Burkholderia phytofirmans PsJN

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	BPHYT_RS00805	BPHYT_RS00810	BPHYT_RS00815	BPHYT_RS00820	BPHYT_RS00825
carbon source	2-Deoxyadenosine 5-monophosphate 5 mM (C)	+0.0	+0.2	-4.8	-0.2	-0.0
phage	36hr PHYTO8 MOI 0.1	+0.2	-0.4	-3.6	-0.1	-0.0
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.2	+0.3	-2.8	-0.3	-0.0
in planta	Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days	-0.0	-0.3	-1.9	-0.3	-0.1
carbon source	Protocatechuic Acid (C)	-0.6	-0.7	-1.4	-0.0	+0.1
phage	24hr PHYTO7 MOI 1	-0.1	-0.2	-1.8	-0.1	-0.0
carbon source	D-Glucose (C)	-0.1	-0.4	-1.6	-0.0	-0.1
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=20h_outgrowth_LB; Time=7_days	+0.1	-0.3	-2.1	+0.1	+0.1
phage	36hr PHYTO10 MOI 10	-0.1	+0.0	-2.1	+0.0	+0.1
nitrogen source	L-Lysine (N)	+0.3	-0.1	-2.1	+0.0	+0.0
phage	36hr PHYTO7 MOI 1	+0.0	+0.1	-2.0	+0.1	+0.0
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.1	+0.1	-1.5	-0.3	-0.0
carbon source	Disodium Glutarate (C)	+0.1	-0.4	-1.4	-0.2	+0.1
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB	+0.2	+0.0	-1.5	-0.1	-0.4
in planta	Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days	-0.1	-0.2	-1.5	+0.1	-0.0
phage	24hr PHYTO2 MOI 1	+0.1	+0.4	-2.3	+0.0	+0.1
carbon source	Phenylacetic 5 mM (C)	-0.2	-0.0	-1.6	-0.1	+0.3
phage	36hr PHYTO8 MOI 10	-0.2	+0.1	-2.0	+0.3	+0.3
nophagecontrol	36hr Phyto Lib Only	-0.1	+0.2	-1.8	+0.0	+0.3
phage	24hr PHYTO4 MOI 10	+0.3	+0.0	-1.8	+0.1	+0.1
phage	24hr PHYTO7 MOI 10	+0.4	-0.4	-1.0	+0.2	-0.1
phage	36hr PHYTO6 MOI 0.1	+0.1	+0.3	-1.5	+0.1	+0.0
phage	24hr PHYTO10 MOI 10	+0.0	-0.0	-1.6	+0.1	+0.5
in planta	Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+0.6	+0.3	-1.0	-0.3	+0.2
in planta	Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.5	+0.4	-0.5	-0.4	+0.4
phage	24hr PHYTO3 MOI 10	-0.2	-0.1	+1.6	+0.0	+0.1
in planta	Plant=Brachypodium_distachyon ; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	+0.2	-0.0	+1.7	-0.1	-0.1
phage	36hr PHYTO6 MOI 1	+0.2	-0.0	+1.7	-0.0	+0.1
phage	24hr PHYTO3 MOI 1	-0.1	+0.5	+0.9	+0.2	+0.4
in planta	Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.2	-0.1	+1.8	+0.1	-0.0