Fitness for 5 genes in Burkholderia phytofirmans PsJN

Top 30 experiments (either direction), sorted by average fitness

Or view all 321 experiments or choose conditions or try the comparative fitness browser

Group	Condition	BPHYT_RS00640	BPHYT_RS00645	BPHYT_RS00650	BPHYT_RS00655	BPHYT_RS00660
in planta	Plant=switchgrass; PlantTreatment=high_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=3weeks; NumberPlantsPooled=10	-0.3	-0.6	-0.1	-0.7	-0.6
phage	24hr PHYTO6 MOI 10	+0.1	-0.4	-0.4	-0.2	-0.4
supernatant control	Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB	-0.3	-0.3	-0.1	-0.5	-0.0
phage	PHYTO3 MOI 0.1	+0.1	-0.5	-0.3	-0.4	-0.1
phage	P. phyto PHYTO2 MOI 1	-0.3	-0.3	-0.2	-0.1	-0.2
phage	36hr PHYTO9 MOI 0.1	+0.1	-0.3	-0.5	+0.1	-0.2
in planta	Plant=Arabidopsis_thaliana_FLS2; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_0.8%agar; Collection=outgrowth_LB; Time=7_days	+0.2	+0.1	-0.3	-0.5	-0.3
phage	24hr PHYTO MOI 0.1	-0.1	-0.4	-0.2	+0.2	-0.3
phage	36hr PHYTO9 MOI 1	-0.2	-0.4	-0.2	+0.3	-0.3
phage	36hr PHYTO7 MOI 1	-0.3	-0.2	-0.4	+0.2	+0.1
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.2	-0.4	-0.2	+0.3	-0.1
in planta	Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1	-0.8	+0.1	+0.2	-0.1	-0.0
phage	24hr PHYTO3 MOI 10	-0.1	-0.6	-0.1	+0.3	-0.1
phage	24hr PHYTO3 MOI 1	+0.3	-0.3	+0.0	-0.2	-0.3
nophagecontrol	24hr Phyto Lib Only	+0.3	-0.4	-0.4	+0.3	-0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.2	-0.3	-0.1	-0.3	+0.2
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days	-0.4	-0.1	-0.0	+0.4	+0.1
carbon source	adipate (C)	+0.2	+0.2	-0.2	-0.3	+0.1
phage	P. phyto corn MOI 1	-0.3	-0.1	-0.1	+0.4	+0.3
phage	36hr PHYTO2 MOI 1	+0.3	-0.1	-0.1	+0.4	-0.2
supernatant control:fungal media	R2A with Vogels_fungal_media 0.8X	+0.1	-0.1	+0.2	+0.6	-0.2
phage	P. phyto PHYTO2 MOI 1	+0.3	-0.1	-0.1	+0.3	+0.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	+0.2	+0.3	-0.1	+0.5	-0.2
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	+0.2	+0.4	+0.2	+0.2	+0.1
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	+0.1	+0.3	+0.3	+0.2	+0.3
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	+0.3	+0.4	+0.2	+0.2	+0.2
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	+0.2	+0.3	+0.4	+0.4	+0.0
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	+0.3	+0.4	+0.2	+0.2	+0.4
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	+0.4	+0.4	+0.4	+0.3	+0.3
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	+0.3	+0.6	+0.3	+0.5	+0.4