Fitness for 5 genes in Burkholderia phytofirmans PsJN

Top 30 experiments (either direction), sorted by average fitness

Or view all 321 experiments or choose conditions or try the comparative fitness browser

Group	Condition	BPHYT_RS00335	BPHYT_RS00340	BPHYT_RS00345	BPHYT_RS00350	BPHYT_RS00355
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-1.1	+0.1	-0.4	-0.4	-1.0
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-1.2	-0.1	-0.4	-0.6	-0.5
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=20h_outgrowth_LB; Time=7_days	-0.8	-0.7	-0.1	-0.5	-0.4
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-1.1	-0.2	-0.4	-0.5	-0.2
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.6	-0.1	-0.4	-0.5	-0.6
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.7	+0.3	-0.4	-0.7	-0.8
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.5	-0.0	-0.2	-0.7	-0.8
carbon source	Deoxyribonucleic from herring sperm 10 mg/mL (C)	-0.6	-0.6	-0.1	-0.6	-0.2
carbon source	D-Glucose (C)	+0.1	-0.3	-0.1	-1.3	-0.5
carbon source	Sebacic (C)	+0.5	-2.4	-0.2	+0.5	-0.5
carbon source	Deoxyribonucleic from herring sperm 10 mg/mL (C)	-0.6	-0.5	-0.3	-0.7	+0.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+0.3	-0.3	+0.1	-0.9	-0.8
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-0.0	+0.3	+0.0	-0.8	-1.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+0.2	-0.6	+0.3	-1.1	-0.3
nitrogen source	L-Isoleucine (N)	+0.4	-0.8	-0.2	-0.7	-0.2
phage	36hr PHYTO9 MOI 1	-0.8	-0.5	-0.3	+0.7	-0.2
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.5	+0.6	-0.3	-0.5	-0.3
nitrogen source	L-Glutamine (N)	+0.4	+0.1	+0.1	-1.0	-0.6
phage	P. phyto PHYTO2 MOI 1	-0.8	-0.1	+0.4	+0.3	-0.8
phage	24hr PHYTO10 MOI 10	-0.6	+0.3	-0.1	+0.8	-1.1
phage	24hr PHYTO10 MOI 1	+0.3	+0.8	-0.1	-0.7	-1.0
in planta	Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	-0.3	-1.5	+0.3	+1.1	+0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+0.9	-0.6	+0.3	-0.7	-0.0
phage	36hr PHYTO6 MOI 10	+0.5	-0.4	-0.2	+0.6	-0.4
phage	36hr PHYTO1 MOI 1	+0.4	+0.4	+0.1	+1.2	-0.6
phage	24hr PHYTO4 MOI 10	+0.3	+0.8	+0.1	+1.0	-0.5
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB	+0.5	-0.4	+0.4	+0.7	+0.8
phage	24hr PHYTO3 MOI 10	+0.8	+0.5	+0.3	+0.2	+0.5
phage	36hr PHYTO11 MOI 1	+1.1	+0.7	-0.2	+0.6	-0.1
in planta	Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days	-0.0	+0.4	-0.0	+2.5	-0.2