Fitness for 5 genes in Burkholderia phytofirmans PsJN

Top 30 experiments (either direction), sorted by average fitness

Or view all 321 experiments or choose conditions or try the comparative fitness browser

Group	Condition	BPHYT_RS00110	BPHYT_RS00115	BPHYT_RS00120	BPHYT_RS00125	BPHYT_RS00130
stress	Zinc 0.5 mM	+0.2	+0.6	-0.1	+0.1	-6.3
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.6	-1.4	-1.1	+0.1	-0.2
nitrogen source	L-Lysine (N)	-0.1	-2.4	-0.0	-0.2	-0.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-0.3	-1.3	-0.5	-0.5	-0.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	-0.9	-1.2	+0.1	-0.3	-0.1
in planta	Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=21days	-0.6	-0.8	-1.0	+0.2	-0.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-0.6	-2.2	+0.3	-0.3	+0.6
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.1	-1.8	-0.1	-0.0	-0.2
phage	36hr PHYTO7 MOI 0.1	-0.3	-1.1	-0.3	-0.2	-0.2
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB	+0.0	-2.8	+0.1	+0.3	+0.3
nitrogen source	L-Serine (N)	-1.2	+0.2	-0.3	-0.3	-0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+0.3	-1.2	-0.3	-0.4	-0.2
phage	36hr PHYTO11 MOI 1	+0.1	-0.9	-0.6	-0.1	-0.4
carbon source	D-Glucose (C)	-0.3	-1.4	+0.1	-0.2	-0.0
in planta	Plant=Zea_mays; PlantTreatment=None; sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=15_days	+0.2	-0.7	-0.7	-0.2	-0.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	+0.1	-1.5	+0.4	+0.1	-0.6
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-1.2	+0.7	-0.6	-0.5	+0.1
carbon source	Phenylacetic 5 mM (C)	+0.2	-1.2	-0.3	-0.2	+0.3
r2a control	R2A control	-0.3	+1.0	-0.4	-0.3	-0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	-0.2	+1.4	-0.3	-0.3	-0.5
in planta	Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days	-0.6	+1.5	-0.3	+0.4	-0.0
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.3	+0.7	-0.3	+0.4	+0.5
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.1	+1.4	+0.4	+0.0	+0.1
supernatant control	Vogels_fungal_media; pH 5.5	+0.9	+0.6	+0.5	+0.0	-0.3
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.3	+1.4	+0.2	+0.2	+0.3
in planta	Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days	+0.6	+1.3	-0.0	+0.1	+0.0
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.2	+1.9	+0.3	-0.0	+0.3
in planta	Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days	-0.4	+3.3	-0.3	-0.0	-0.1
in planta	Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days	-0.4	+3.4	-0.1	-0.1	-0.3
in planta	Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days	+0.3	+3.5	-0.1	+0.2	+0.1