Fitness for 5 genes in Bifidobacterium breve UCC2003

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500 ntBBR_RS19460 and BBR_RS19465 are separated by 186 nucleotidesBBR_RS19465 and BBR_RS19470 are separated by 442 nucleotidesBBR_RS19470 and BBR_RS19475 are separated by 105 nucleotidesBBR_RS19475 and BBR_RS19480 are separated by 75 nucleotides BBR_RS19460: BBR_RS19460 - 50S ribosomal protein L21, at 2,148,300 to 2,148,608 _RS19460 BBR_RS19465: BBR_RS19465 - ribonuclease E/G, at 2,148,795 to 2,151,857 _RS19465 BBR_RS19470: BBR_RS19470 - succinyl-diaminopimelate desuccinylase, at 2,152,300 to 2,153,505 _RS19470 BBR_RS19475: BBR_RS19475 - AEC family transporter, at 2,153,611 to 2,154,555 _RS19475 BBR_RS19480: BBR_RS19480 - dihydrodipicolinate synthase family protein, at 2,154,631 to 2,155,524 _RS19480
Group Condition BBR_RS19460 BBR_RS19465 BBR_RS19470 BBR_RS19475 BBR_RS19480
nutrient dropout CDM1 without Serine N.D. -1.2 -4.6 -6.7 +0.1
nutrient dropout CDM1 with Glycine Leucine Cysteine Methionine Glutamate as the only aminos N.D. -1.6 -5.7 -5.0 -0.1
nutrient dropout CDM1 without Lysine N.D. -0.0 -6.5 -5.6 +0.2
nutrient dropout CDM1 without Guanine N.D. -0.9 -5.0 -6.2 +0.2
nutrient dropout CDM1 without Glycine N.D. -1.9 -4.9 -5.4 +0.4
nutrient dropout CDM1 with Glycine Leucine Cysteine Methionine Glutamate as the only aminos N.D. -0.3 -6.4 -4.7 +0.1
nutrient dropout CDM1 without Valine N.D. -1.2 -3.9 -6.4 +0.1
nutrient dropout CDM1 without Serine N.D. -0.5 -4.6 -6.3 +0.0
nutrient dropout CDM1 without Glycine N.D. -0.5 -5.5 -5.3 +0.1
nutrient dropout CDM1 without Uracil N.D. -1.0 -4.1 -6.1 +0.2
nutrient dropout CDM1 without Valine N.D. -0.3 -4.4 -6.3 +0.1
nutrient dropout CDM1 without Glutathione N.D. -0.8 -4.1 -6.1 +0.1
nutrient dropout CDM1 without Asparagine N.D. -0.1 -4.3 -6.5 +0.0
nutrient dropout CDM1 without Pyridoxamine N.D. -0.6 -4.2 -6.2 +0.2
nutrient dropout CDM1 without Histidine N.D. -0.9 -3.6 -6.4 +0.0
nutrient dropout CDM1 without Proline N.D. -0.6 -4.1 -6.2 +0.2
nutrient dropout CDM1 without Cytosine N.D. -1.1 -4.1 -5.7 +0.1
chicken chicken 5; day 6; diet=StandardDiet; sample=FecalPellet N.D. -5.4 -5.2 -0.1 +0.0
nutrient dropout CDM1 without Adenine N.D. -0.4 -4.3 -6.2 +0.2
nutrient dropout control CDM1 N.D. -0.0 -4.6 -6.1 +0.1
nutrient dropout CDM1 without Leucine N.D. +0.1 -4.8 -5.8 +0.1
nutrient dropout CDM1 without Tyrosine N.D. +0.0 -4.0 -6.6 +0.2
nutrient dropout CDM1 without Lysine N.D. +0.8 -6.4 -4.8 +0.2
nutrient dropout CDM1 without FolicAcid N.D. +1.2 -6.0 -5.0 +0.1
nutrient dropout CDM1 without Glutathione N.D. +0.5 -4.1 -6.0 +0.0
nutrient dropout CDM1 without LipoicAcid N.D. +0.5 -4.5 -5.8 +0.2
nutrient dropout CDM1 without Nicotinate N.D. +1.1 -4.8 -5.8 +0.2
nutrient dropout control CDM1 N.D. +0.7 -3.8 -6.3 +0.2
nutrient dropout CDM1 without Phenylalanine N.D. +1.2 -5.7 -4.3 +0.0
nutrient dropout CDM1 without Proline N.D. +1.1 -4.0 -5.5 +0.2
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