Fitness for 5 genes in Bifidobacterium breve UCC2003

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500 ntBBR_RS19200 and BBR_RS19205 overlap by 1 nucleotidesBBR_RS19205 and BBR_RS19210 are separated by 138 nucleotidesBBR_RS19210 and BBR_RS19215 are separated by 62 nucleotidesBBR_RS19215 and BBR_RS19220 overlap by 4 nucleotides BBR_RS19200: BBR_RS19200 - hypothetical protein, at 2,082,921 to 2,083,394 _RS19200 BBR_RS19205: BBR_RS19205 - Evolved beta-galactosidase subunit alpha, at 2,083,394 to 2,086,558 _RS19205 BBR_RS19210: BBR_RS19210 - beta-phosphoglucomutase, at 2,086,697 to 2,087,338 _RS19210 BBR_RS19215: BBR_RS19215 - EamA/RhaT family transporter, at 2,087,401 to 2,088,309 _RS19215 BBR_RS19220: BBR_RS19220 - glycoside hydrolase family 65 protein, at 2,088,306 to 2,090,639 _RS19220
Group Condition BBR_RS19200 BBR_RS19205 BBR_RS19210 BBR_RS19215 BBR_RS19220
mouse diet=StandardDiet; sample=FecalPellet; mouse1; day4 -7.4 -7.1 -3.1 -2.4 -5.4
mouse diet=StandardDiet; sample=FecalPellet; mouse2; day4 -7.5 -6.9 -3.0 -2.9 -5.2
mouse coculture cage1; mouse2; day5; diet=StandardDiet; sample=FecalPellet; coculture=Btheta_VPI5482 -7.7 -7.6 -2.8 -2.3 -4.9
mouse diet=StandardDiet; sample=FecalPellet; mouse5; day4 -7.4 -7.1 -2.9 -2.7 -4.8
mouse coculture cage1; mouse1; day5; diet=StandardDiet; sample=FecalPellet; coculture=Btheta_VPI5482 -7.3 -7.3 -2.8 -2.4 -4.8
mouse coculture cage1; mouse3; day4; diet=StandardDiet; sample=FecalPellet; coculture=Btheta_VPI5482 -7.5 -7.7 -2.6 -2.1 -4.6
mouse diet=StandardDiet2; sample=FecalPellet; mouse18; day4 -7.9 -7.2 -2.6 -2.4 -4.3
mouse diet=StandardDiet; sample=FecalPellet; mouse3; day4 -7.4 -7.2 -3.0 -2.2 -4.5
mouse diet=StandardDiet2; sample=FecalPellet; mouse16; day4 -7.1 -7.1 -2.5 -2.0 -4.7
mouse diet=StandardDiet; sample=FecalPellet; mouse3; day3 -7.1 -7.1 -2.6 -2.0 -4.4
mouse diet=StandardDiet2; sample=FecalPellet; mouse17; day4 -6.4 -6.6 -2.9 -2.5 -4.7
mouse diet=StandardDiet; sample=FecalPellet; mouse4; day3 -6.9 -6.9 -2.3 -2.6 -4.4
mouse coculture cage1; mouse2; day4; diet=StandardDiet; sample=FecalPellet; coculture=Btheta_VPI5482 -7.0 -7.2 -2.5 -2.0 -4.3
mouse diet=StandardDiet2; sample=FecalPellet; mouse16; day3 -7.0 -6.7 -3.0 -1.8 -4.4
mouse diet=StandardDiet2; sample=FecalPellet; mouse18; day3 -6.4 -6.7 -2.9 -2.0 -4.6
mouse diet=StandardDiet; sample=FecalPellet; mouse2; day3 -6.0 -6.8 -2.8 -2.5 -4.5
mouse diet=StandardDiet; sample=FecalPellet; mouse1; day3 -6.7 -6.9 -2.2 -2.3 -4.4
mouse coculture cage1; mouse3; day5; diet=StandardDiet; sample=FecalPellet; coculture=Btheta_VPI5482 -6.4 -6.5 -2.9 -2.1 -4.3
mouse diet=StandardDiet2; sample=FecalPellet; mouse17; day3 -5.8 -6.7 -2.6 -2.3 -4.4
mouse diet=StandardDiet; sample=FecalPellet; mouse4; day2 -6.0 -6.3 -2.3 -2.3 -4.5
mouse diet=StandardDiet; sample=FecalPellet; treatment=Methotrexate; mouse18; day4 -6.7 -6.2 -2.1 -1.7 -4.1
mouse diet=StandardDiet; sample=FecalPellet; treatment=Methotrexate; mouse18; day5 -6.4 -6.1 -2.3 -2.2 -3.7
mouse diet=StandardDiet; sample=FecalPellet; treatment=Methotrexate; mouse16; day4 -6.8 -6.3 -2.3 -1.7 -3.6
mouse coculture cage1; mouse1; day3; diet=StandardDiet; sample=FecalPellet; coculture=Btheta_VPI5482 -6.0 -6.8 -2.1 -1.9 -3.8
mouse diet=StandardDiet; sample=FecalPellet; treatment=Methotrexate; mouse16; day3 -6.6 -6.1 -2.3 -1.7 -3.7
mouse coculture cage1; mouse3; day3; diet=StandardDiet; sample=FecalPellet; coculture=Btheta_VPI5482 -6.9 -6.0 -2.0 -1.8 -3.6
mouse diet=StandardDiet; sample=FecalPellet; mouse5; day3 -5.6 -6.2 -2.5 -1.8 -4.1
mouse diet=StandardDiet; sample=FecalPellet; treatment=Methotrexate; mouse16; day5 -6.1 -5.8 -2.4 -1.7 -3.9
mouse diet=StandardDiet; sample=FecalPellet; treatment=Methotrexate; mouse17; day4 -6.7 -6.3 -1.7 -1.3 -3.8
mouse diet=StandardDiet; sample=FecalPellet; treatment=Methotrexate; mouse16; day6 -5.6 -5.3 -2.5 -2.1 -4.2
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