Fitness for 5 genes in Bifidobacterium breve UCC2003

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500 ntBBR_RS18720 and BBR_RS18725 are separated by 54 nucleotidesBBR_RS18725 and BBR_RS18730 are separated by 130 nucleotidesBBR_RS18730 and BBR_RS21065 are separated by 189 nucleotidesBBR_RS21065 and BBR_RS18735 are separated by 149 nucleotides BBR_RS18720: BBR_RS18720 - pyridine nucleotide-disulfide oxidoreductase, at 1,990,160 to 1,991,668 _RS18720 BBR_RS18725: BBR_RS18725 - ribonuclease HI, at 1,991,723 to 1,992,820 _RS18725 BBR_RS18730: BBR_RS18730 - ribose-5-phosphate isomerase RpiA, at 1,992,951 to 1,993,649 _RS18730 BBR_RS21065: BBR_RS21065 - AURKAIP1/COX24 domain-containing protein, at 1,993,839 to 1,993,928 _RS21065 BBR_RS18735: BBR_RS18735 - hypothetical protein, at 1,994,078 to 1,994,701 _RS18735
Group Condition BBR_RS18720 BBR_RS18725 BBR_RS18730 BBR_RS21065 BBR_RS18735
nutrient dropout CDM1 without Adenine +0.2 -5.1 N.D. N.D. -8.3
nutrient dropout CDM1 without Pantothenate +0.2 -5.3 N.D. N.D. -7.6
nutrient dropout control CDM1 +0.1 -5.4 N.D. N.D. -7.2
nutrient dropout CDM1 without Histidine +0.1 -4.7 N.D. N.D. -7.7
nutrient dropout CDM1 without Guanine +0.2 -4.4 N.D. N.D. -8.0
nutrient dropout CDM1 without Lysine -0.0 -5.9 N.D. N.D. -6.1
nutrient dropout control CDM1 +0.2 -4.4 N.D. N.D. -7.6
nutrient dropout CDM1 without Tyrosine +0.1 -3.7 N.D. N.D. -8.2
nutrient dropout CDM1 without Leucine +0.2 -3.8 N.D. N.D. -8.1
nutrient dropout CDM1 without Proline +0.2 -4.3 N.D. N.D. -7.2
nutrient dropout CDM1 without Valine +0.2 -3.4 N.D. N.D. -8.2
nutrient dropout CDM1 without Arginine +0.2 -4.4 N.D. N.D. -7.1
mouse diet=StandardDiet2; sample=FecalPellet; mouse18; day3 +0.1 -5.3 N.D. N.D. -6.1
nutrient dropout CDM1 without Glutathione +0.0 -3.7 N.D. N.D. -7.6
nutrient dropout control CDM1 +0.2 -3.9 N.D. N.D. -7.5
nutrient dropout CDM1 without Pyridoxamine +0.2 -3.9 N.D. N.D. -7.5
nutrient dropout CDM1 without Threonine +0.2 -3.9 N.D. N.D. -7.6
nutrient dropout CDM1 without Cyanocobalamin +0.3 -4.1 N.D. N.D. -7.4
nutrient dropout CDM1 without LipoicAcid +0.3 -4.3 N.D. N.D. -7.2
nutrient dropout CDM1 without Serine +0.2 -3.9 N.D. N.D. -7.4
chicken chicken 5; day 6; diet=StandardDiet; sample=FecalPellet +0.0 -4.4 N.D. N.D. -6.7
nutrient dropout CDM1 without Uracil -0.0 -3.4 N.D. N.D. -7.5
nutrient dropout control CDM1 +0.2 -3.5 N.D. N.D. -7.7
nutrient dropout CDM1 without Asparagine +0.3 -3.9 N.D. N.D. -7.3
nutrient dropout CDM1 without Biotin +0.3 -4.2 N.D. N.D. -7.0
nutrient dropout CDM1 without Arginine +0.1 -4.3 N.D. N.D. -6.7
nutrient dropout control CDM1 +0.0 -4.6 N.D. N.D. -6.3
nutrient dropout CDM1 without Alanine +0.3 -3.4 N.D. N.D. -7.4
nutrient dropout CDM1 without Thiamine +0.2 -3.1 N.D. N.D. -7.6
nutrient dropout CDM1 without FolicAcid +0.4 -3.2 N.D. N.D. -7.6
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