Fitness for 5 genes in Bifidobacterium breve UCC2003

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500 ntBBR_RS18710 and BBR_RS18715 are separated by 195 nucleotidesBBR_RS18715 and BBR_RS18720 are separated by 282 nucleotidesBBR_RS18720 and BBR_RS18725 are separated by 54 nucleotidesBBR_RS18725 and BBR_RS18730 are separated by 130 nucleotides BBR_RS18710: BBR_RS18710 - hypothetical protein, at 1,988,183 to 1,989,250 _RS18710 BBR_RS18715: BBR_RS18715 - transcriptional regulator, at 1,989,446 to 1,989,877 _RS18715 BBR_RS18720: BBR_RS18720 - pyridine nucleotide-disulfide oxidoreductase, at 1,990,160 to 1,991,668 _RS18720 BBR_RS18725: BBR_RS18725 - ribonuclease HI, at 1,991,723 to 1,992,820 _RS18725 BBR_RS18730: BBR_RS18730 - ribose-5-phosphate isomerase RpiA, at 1,992,951 to 1,993,649 _RS18730
Group Condition BBR_RS18710 BBR_RS18715 BBR_RS18720 BBR_RS18725 BBR_RS18730
nutrient dropout CDM1 without Lysine -0.3 +0.4 -0.0 -5.9 N.D.
mouse diet=StandardDiet2; sample=FecalPellet; mouse18; day3 +0.2 -0.8 +0.1 -5.3 N.D.
nutrient dropout control CDM1 -0.4 +0.7 +0.1 -5.4 N.D.
stress Recovery broth with Benzethonium chloride 0.1 mM +0.2 -0.6 -0.1 -4.6 N.D.
nutrient dropout CDM1 without Pantothenate -0.3 +0.7 +0.2 -5.3 N.D.
stress Recovery broth with 3-Acetylpyridine 0.08 mM -0.0 -0.4 -0.4 -3.8 N.D.
nutrient dropout CDM1 without Glycine -0.7 +0.1 +0.2 -4.3 N.D.
nutrient dropout CDM1 without Tyrosine -0.3 +0.3 +0.0 -4.5 N.D.
chicken chicken 5; day 6; diet=StandardDiet; sample=FecalPellet +0.4 -0.5 +0.0 -4.4 N.D.
nutrient dropout CDM1 without Adenine -0.3 +0.8 +0.2 -5.1 N.D.
nutrient dropout CDM1 without Histidine -0.2 +0.4 +0.1 -4.7 N.D.
nutrient dropout control CDM1 -0.4 +0.7 +0.0 -4.6 N.D.
nutrient dropout CDM1 without Arginine -0.5 +0.5 +0.1 -4.3 N.D.
mouse diet=StandardDiet2; sample=FecalPellet; mouse17; day3 +0.3 -0.5 -0.0 -3.9 N.D.
nutrient dropout control CDM1 -0.2 +0.5 +0.2 -4.4 N.D.
nutrient dropout CDM1 without Arginine -0.4 +0.6 +0.2 -4.4 N.D.
nutrient dropout CDM1 without Guanine -0.3 +0.7 +0.2 -4.4 N.D.
nutrient dropout CDM1 without LipoicAcid -0.3 +0.7 +0.3 -4.3 N.D.
nutrient dropout control CDM1 -0.4 +0.5 +0.2 -3.9 N.D.
nutrient dropout CDM1 without Proline -0.2 +0.7 +0.2 -4.3 N.D.
nutrient dropout CDM1 without Pyridoxamine -0.4 +0.6 +0.2 -3.9 N.D.
nutrient dropout CDM1 without Nicotinate -0.1 +0.5 +0.0 -3.9 N.D.
nutrient dropout CDM1 without Biotin -0.2 +0.8 +0.3 -4.2 N.D.
nutrient dropout CDM1 without Tyrosine -0.2 +0.4 +0.1 -3.7 N.D.
nutrient dropout CDM1 without Threonine -0.2 +0.6 +0.2 -3.9 N.D.
nutrient dropout CDM1 without Cyanocobalamin -0.0 +0.6 +0.3 -4.1 N.D.
nutrient dropout CDM1 without Asparagine -0.3 +0.8 +0.3 -3.9 N.D.
nutrient dropout CDM1 without Leucine -0.2 +0.7 +0.2 -3.8 N.D.
nutrient dropout CDM1 without Alanine -0.3 +0.6 +0.3 -3.4 N.D.
nutrient dropout control CDM1 -0.2 +0.6 +0.2 -3.5 N.D.
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