Fitness for 5 genes in Bifidobacterium breve UCC2003

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 747 experiments or choose conditions or try the comparative fitness browser

500 ntBBR_RS18045 and BBR_RS18050 overlap by 4 nucleotidesBBR_RS18050 and BBR_RS18055 are separated by 134 nucleotidesBBR_RS18055 and BBR_RS18060 overlap by 1 nucleotidesBBR_RS18060 and BBR_RS18065 overlap by 4 nucleotides BBR_RS18045: BBR_RS18045 - undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase, at 1,838,803 to 1,840,050 _RS18045 BBR_RS18050: BBR_RS18050 - threonylcarbamoyl-AMP synthase, at 1,840,047 to 1,840,733 _RS18050 BBR_RS18055: BBR_RS18055 - ABC transporter ATP-binding protein, at 1,840,868 to 1,841,572 _RS18055 BBR_RS18060: BBR_RS18060 - ABC transporter ATP-binding protein, at 1,841,572 to 1,842,435 _RS18060 BBR_RS18065: BBR_RS18065 - branched-chain amino acid ABC transporter permease, at 1,842,432 to 1,843,520 _RS18065
Group Condition BBR_RS18045 BBR_RS18050 BBR_RS18055 BBR_RS18060 BBR_RS18065
mouse diet=StandardDiet; sample=FecalPellet; mouse5; day3 -6.0 -4.3 +0.1 +0.1 -0.3
mouse diet=StandardDiet; sample=FecalPellet; mouse4; day3 -5.9 -4.3 +0.2 -0.1 +0.2
mouse diet=StandardDiet; sample=FecalPellet; mouse3; day3 -5.9 -3.7 +0.1 +0.3 -0.3
mouse diet=StandardDiet; sample=FecalPellet; mouse1; day3 -6.0 -4.1 +0.1 +0.3 +0.2
mouse preculture cage3; mouse3; day4; diet=PolysaccharideDeficient; sample=FecalPellet; coculture=Btheta_VPI5482; stagger=24hrs -5.6 -3.1 -0.5 +0.0 -0.1
mouse diet=StandardDiet; sample=FecalPellet; treatment=Methotrexate; mouse16; day2 -5.7 -3.5 +0.1 -0.1 +0.2
chicken chicken 1; day 2; diet=StandardDiet; sample=FecalPellet -5.3 -3.5 -0.0 -0.1 +0.1
mouse diet=StandardDiet; sample=FecalPellet; mouse5; day4 -5.3 -3.3 +0.1 +0.1 +0.0
mouse diet=StandardDiet; sample=FecalPellet; mouse4; day4 -5.2 -3.0 -0.1 +0.2 -0.1
mouse coculture cage1; mouse3; day5; diet=StandardDiet; sample=FecalPellet; coculture=Btheta_VPI5482 -3.8 -4.3 +0.1 +0.2 -0.1
mouse diet=StandardDiet; sample=FecalPellet; treatment=Methotrexate; mouse18; day4 -5.3 -2.7 +0.1 -0.1 +0.2
mouse diet=StandardDiet; sample=FecalPellet; treatment=Methotrexate; mouse18; day6 -4.9 -2.8 -0.2 +0.4 -0.2
mouse diet=StandardDiet; sample=FecalPellet; treatment=Methotrexate; mouse16; day6 -4.7 -2.7 -0.3 +0.3 -0.0
mouse diet=StandardDiet; sample=FecalPellet; mouse5; day5 -4.8 -2.5 -0.1 +0.2 -0.0
mouse coculture cage1; mouse3; day4; diet=StandardDiet; sample=FecalPellet; coculture=Btheta_VPI5482 -2.3 -4.9 -0.0 +0.1 -0.1
mouse diet=StandardDiet; sample=FecalPellet; mouse5; day4 -5.6 -2.0 +0.4 +0.0 +0.0
mouse preculture cage3; mouse3; day5; diet=PolysaccharideDeficient; sample=FecalPellet; coculture=Btheta_VPI5482; stagger=24hrs -5.1 -2.7 +0.1 +0.6 +0.0
chicken chicken 2; day 5; diet=StandardDiet; sample=FecalPellet -5.0 -1.7 -0.0 -0.3 +0.0
chicken chicken 2; day 6; diet=StandardDiet; sample=FecalPellet -4.3 -1.5 -0.9 -0.6 +0.4
mouse diet=StandardDiet; sample=FecalPellet; mouse4; day2 -5.3 -2.0 +0.1 +0.4 +0.1
mouse diet=HighFatHighSugar; sample=FecalPellet; mouse12; day1 -2.5 -4.8 +0.1 +0.3 +0.2
mouse mouse 2; day 2; diet=StandardDiet; sample=FecalPellet -5.1 -1.5 -0.0 -0.2 +0.2
mouse diet=HighFatHighSugar; sample=FecalPellet; mouse14; day1 -2.3 -4.6 -0.0 +0.1 +0.2
mouse diet=StandardDiet2; sample=FecalPellet; mouse16; day4 -5.7 -1.2 +0.4 +0.1 +0.1
mouse diet=HighFatHighSugar; sample=FecalPellet; mouse12; day2 -1.7 -4.6 +0.0 +0.4 -0.1
mouse diet=StandardDiet; sample=FecalPellet; treatment=Methotrexate; mouse16; day5 -2.8 -3.2 +0.0 +0.4 -0.2
mouse diet=StandardDiet2; sample=FecalPellet; mouse17; day3 -1.5 -4.2 -0.3 -0.0 +0.3
chicken chicken 5; day 7; diet=StandardDiet; sample=FecalPellet -3.1 -2.8 +0.5 -0.3 +0.3
mouse diet=HighFatHighSugar; sample=FecalPellet; mouse13; day1 -6.1 +0.3 +0.2 +0.2 +0.1
mouse diet=StandardDiet2; sample=FecalPellet; mouse18; day2 +1.5 -4.8 +0.4 +0.0 -0.0
remove
BBR_RS18045
plot		 remove
BBR_RS18050
plot		 remove
BBR_RS18055		 remove
BBR_RS18060
plot		 remove
BBR_RS18065
plot