Fitness for 5 genes in Bifidobacterium breve UCC2003

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 747 experiments or choose conditions or try the comparative fitness browser

500 ntBBR_RS17280 and BBR_RS17285 are separated by 281 nucleotidesBBR_RS17285 and BBR_RS17290 are separated by 13 nucleotidesBBR_RS17290 and BBR_RS17295 are separated by 64 nucleotidesBBR_RS17295 and BBR_RS17300 are separated by 83 nucleotides BBR_RS17280: BBR_RS17280 - glycosyl transferase, at 1,654,671 to 1,655,693 _RS17280 BBR_RS17285: BBR_RS17285 - ECF transporter S component, at 1,655,975 to 1,656,631 _RS17285 BBR_RS17290: BBR_RS17290 - Fused ATP-binding protein and permease of ABC transporter, at 1,656,645 to 1,658,996 _RS17290 BBR_RS17295: BBR_RS17295 - RNA-binding protein, at 1,659,061 to 1,659,366 _RS17295 BBR_RS17300: BBR_RS17300 - membrane protein, at 1,659,450 to 1,659,815 _RS17300
Group Condition BBR_RS17280 BBR_RS17285 BBR_RS17290 BBR_RS17295 BBR_RS17300
mouse coculture cage1; mouse1; day3; diet=StandardDiet; sample=FecalPellet; coculture=Btheta_VPI5482 N.D. N.D. -6.8 -0.1 -0.3
mouse preculture cage3; mouse1; day4; diet=PolysaccharideDeficient; sample=FecalPellet; coculture=Btheta_VPI5482; stagger=24hrs N.D. N.D. -5.9 -1.1 +0.1
mouse preculture cage3; mouse1; day3; diet=PolysaccharideDeficient; sample=FecalPellet; coculture=Btheta_VPI5482; stagger=24hrs N.D. N.D. -5.2 -1.0 -0.7
chicken chicken 2; day 5; diet=StandardDiet; sample=FecalPellet N.D. N.D. -4.3 -2.5 +0.1
mouse diet=StandardDiet; sample=FecalPellet; mouse5; day3 N.D. N.D. -3.8 -2.5 -0.3
nutrient dropout CDM1 without Adenine N.D. N.D. -5.1 -0.6 -0.7
mouse preculture cage3; mouse2; day5; diet=PolysaccharideDeficient; sample=FecalPellet; coculture=Btheta_VPI5482; stagger=24hrs N.D. N.D. -5.5 +0.4 -1.0
mouse coculture cage1; mouse1; day5; diet=StandardDiet; sample=FecalPellet; coculture=Btheta_VPI5482 N.D. N.D. -6.0 +0.2 -0.4
mouse preculture cage3; mouse1; day5; diet=PolysaccharideDeficient; sample=FecalPellet; coculture=Btheta_VPI5482; stagger=24hrs N.D. N.D. -6.1 -0.9 +0.9
mouse coculture cage1; mouse3; day3; diet=StandardDiet; sample=FecalPellet; coculture=Btheta_VPI5482 N.D. N.D. -6.0 -0.1 +0.0
mouse coculture cage1; mouse2; day5; diet=StandardDiet; sample=FecalPellet; coculture=Btheta_VPI5482 N.D. N.D. -6.1 +0.3 -0.1
mouse coculture cage1; mouse2; day4; diet=StandardDiet; sample=FecalPellet; coculture=Btheta_VPI5482 N.D. N.D. -6.1 +0.2 +0.0
mouse diet=StandardDiet2; sample=FecalPellet; mouse18; day2 N.D. N.D. -3.3 -1.8 -0.6
mouse coculture cage1; mouse2; day3; diet=StandardDiet; sample=FecalPellet; coculture=Btheta_VPI5482 N.D. N.D. -5.9 +0.1 +0.1
mouse coculture cage1; mouse3; day4; diet=StandardDiet; sample=FecalPellet; coculture=Btheta_VPI5482 N.D. N.D. -5.6 +0.3 -0.4
nutrient dropout CDM1 without Pyridoxamine N.D. N.D. -5.1 -0.5 +0.0
nutrient dropout CDM1 without Valine N.D. N.D. -5.4 +0.2 -0.3
nutrient dropout CDM1 without Biotin N.D. N.D. -4.5 +0.2 -1.2
mouse coculture cage1; mouse1; day2; diet=StandardDiet; sample=FecalPellet; coculture=Btheta_VPI5482 N.D. N.D. -5.7 +0.1 +0.2
nutrient dropout control CDM1 N.D. N.D. -5.4 +0.2 -0.1
mouse coculture cage1; mouse2; day2; diet=StandardDiet; sample=FecalPellet; coculture=Btheta_VPI5482 N.D. N.D. -5.9 +0.2 +0.3
mouse coculture cage2; mouse2; day2; diet=PolysaccharideDeficient; sample=FecalPellet; coculture=Btheta_VPI5482 N.D. N.D. -5.2 +0.3 -0.4
chicken chicken 3; day 3; diet=StandardDiet; sample=FecalPellet N.D. N.D. -4.9 +0.5 -0.6
mouse preculture cage3; mouse3; day5; diet=PolysaccharideDeficient; sample=FecalPellet; coculture=Btheta_VPI5482; stagger=24hrs N.D. N.D. -3.9 -1.6 +0.5
nutrient dropout control CDM1 N.D. N.D. -5.1 +0.7 -0.4
nutrient dropout CDM1 without Glutathione N.D. N.D. -4.9 +0.6 -0.5
nutrient dropout CDM1 without Serine N.D. N.D. -5.4 +0.6 +0.1
mouse diet=StandardDiet; sample=FecalPellet; mouse4; day3 N.D. N.D. -3.7 +1.2 -1.4
nutrient dropout CDM1 without LipoicAcid N.D. N.D. -4.8 +0.7 +0.3
stress Recovery broth with Metronidazole 0.03 mM N.D. N.D. +5.6 +0.4 +0.2
remove
BBR_RS17280
plot		 remove
BBR_RS17285
plot		 remove
BBR_RS17290		 remove
BBR_RS17295
plot		 remove
BBR_RS17300
plot