Fitness for 5 genes in Bifidobacterium breve UCC2003

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	BBR_RS16485	BBR_RS16490	BBR_RS16495	BBR_RS16500	BBR_RS16505
chicken	chicken 1; day 2; diet=StandardDiet; sample=FecalPellet	-0.2	-7.0	-0.1	N.D.	-0.4
mouse coculture	cage1; mouse3; day3; diet=StandardDiet; sample=FecalPellet; coculture=Btheta_VPI5482	+0.1	-7.5	+0.1	N.D.	-0.0
mouse coculture	cage1; mouse1; day2; diet=StandardDiet; sample=FecalPellet; coculture=Btheta_VPI5482	-0.0	-7.0	+0.1	N.D.	-0.3
chicken	chicken 3; day 2; diet=StandardDiet; sample=FecalPellet	-0.1	-6.8	-0.1	N.D.	-0.2
mouse coculture	cage1; mouse2; day4; diet=StandardDiet; sample=FecalPellet; coculture=Btheta_VPI5482	+0.0	-6.9	-0.3	N.D.	+0.1
mouse coculture	cage1; mouse1; day3; diet=StandardDiet; sample=FecalPellet; coculture=Btheta_VPI5482	+0.2	-7.1	+0.0	N.D.	-0.1
mouse coculture	cage1; mouse2; day3; diet=StandardDiet; sample=FecalPellet; coculture=Btheta_VPI5482	+0.2	-7.0	+0.0	N.D.	-0.1
mouse coculture	cage1; mouse2; day5; diet=StandardDiet; sample=FecalPellet; coculture=Btheta_VPI5482	+0.2	-6.5	-0.5	N.D.	+0.0
chicken	chicken 3; day 3; diet=StandardDiet; sample=FecalPellet	+0.0	-6.6	+0.3	N.D.	-0.5
mouse coculture	cage1; mouse3; day2; diet=StandardDiet; sample=FecalPellet; coculture=Btheta_VPI5482	+0.0	-6.8	+0.1	N.D.	-0.1
mouse coculture	cage1; mouse3; day4; diet=StandardDiet; sample=FecalPellet; coculture=Btheta_VPI5482	+0.3	-7.0	-0.2	N.D.	+0.3
chicken	chicken 2; day 5; diet=StandardDiet; sample=FecalPellet	+0.0	-5.9	+0.3	N.D.	-1.0
chicken	chicken 10; day 4; diet=StandardDiet; sample=FecalPellet	-0.1	-6.7	+0.1	N.D.	+0.2
chicken	chicken 10; day 5; diet=StandardDiet; sample=FecalPellet	+0.1	-6.4	-0.1	N.D.	+0.1
chicken coculture	chicken 4; day 3; diet=StandardDiet; sample=FecalPellet; coculture_with=Bacteroides thetaiotaomicron	+0.2	-6.2	+0.1	N.D.	-0.2
mouse coculture	cage1; mouse1; day5; diet=StandardDiet; sample=FecalPellet; coculture=Btheta_VPI5482	+0.1	-6.3	+0.0	N.D.	+0.4
chicken	chicken 21; day 7; diet=StandardDiet; sample=Cecum	+0.2	-5.1	-0.6	N.D.	-0.3
mouse	diet=StandardDiet2; sample=FecalPellet; mouse18; day4	+0.4	-5.3	+0.2	N.D.	-1.1
chicken coculture	chicken 4; day 4; diet=StandardDiet; sample=FecalPellet; coculture_with=Bacteroides thetaiotaomicron	+0.5	-6.0	+0.2	N.D.	-0.2
mouse coculture	cage1; mouse3; day5; diet=StandardDiet; sample=FecalPellet; coculture=Btheta_VPI5482	+0.5	-5.8	-0.4	N.D.	+0.3
mouse	diet=StandardDiet2; sample=FecalPellet; mouse17; day2	+0.3	-5.8	+0.3	N.D.	-0.1
chicken	chicken 5; day 7; diet=StandardDiet; sample=FecalPellet	+0.3	-5.9	+0.2	N.D.	+0.1
mouse	diet=StandardDiet2; sample=FecalPellet; mouse16; day3	-0.2	-5.5	+0.3	N.D.	+0.3
mouse	diet=StandardDiet; sample=FecalPellet; mouse4; day3	+0.2	-5.5	+0.2	N.D.	+0.1
mouse	diet=StandardDiet2; sample=FecalPellet; mouse18; day2	+0.2	-5.5	+0.1	N.D.	+0.3
mouse	diet=StandardDiet; sample=FecalPellet; mouse3; day3	+0.1	-5.5	+0.5	N.D.	+0.2
mouse	diet=StandardDiet; sample=FecalPellet; mouse2; day3	+0.3	-5.1	+0.6	N.D.	-0.3
mouse	diet=StandardDiet; sample=FecalPellet; mouse5; day3	+0.3	-5.6	+0.5	N.D.	+0.2
mouse	diet=StandardDiet2; sample=FecalPellet; mouse17; day3	+0.5	-5.4	+0.7	N.D.	-0.3
mouse	diet=StandardDiet; sample=FecalPellet; mouse1; day2	+0.1	-5.6	+0.8	N.D.	+0.3