Fitness for 5 genes in Bifidobacterium breve UCC2003

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 747 experiments or choose conditions or try the comparative fitness browser

500 ntBBR_RS16480 and BBR_RS16485 are separated by 202 nucleotidesBBR_RS16485 and BBR_RS16490 are separated by 195 nucleotidesBBR_RS16490 and BBR_RS16495 are separated by 114 nucleotidesBBR_RS16495 and BBR_RS16500 are separated by 40 nucleotides BBR_RS16480: BBR_RS16480 - RNA polymerase sigma factor, at 1,462,015 to 1,463,433 _RS16480 BBR_RS16485: BBR_RS16485 - DUF4192 domain-containing protein, at 1,463,636 to 1,464,277 _RS16485 BBR_RS16490: BBR_RS16490 - polyprenyl synthase, at 1,464,473 to 1,465,564 _RS16490 BBR_RS16495: BBR_RS16495 - serine/threonine-protein kinase, at 1,465,679 to 1,467,826 _RS16495 BBR_RS16500: BBR_RS16500 - 1-acyl-sn-glycerol-3-phosphate acyltransferase, at 1,467,867 to 1,468,577 _RS16500
Group Condition BBR_RS16480 BBR_RS16485 BBR_RS16490 BBR_RS16495 BBR_RS16500
mouse coculture cage1; mouse3; day3; diet=StandardDiet; sample=FecalPellet; coculture=Btheta_VPI5482 N.D. +0.1 -7.5 +0.1 N.D.
chicken chicken 1; day 2; diet=StandardDiet; sample=FecalPellet N.D. -0.2 -7.0 -0.1 N.D.
mouse coculture cage1; mouse2; day4; diet=StandardDiet; sample=FecalPellet; coculture=Btheta_VPI5482 N.D. +0.0 -6.9 -0.3 N.D.
mouse coculture cage1; mouse1; day3; diet=StandardDiet; sample=FecalPellet; coculture=Btheta_VPI5482 N.D. +0.2 -7.1 +0.0 N.D.
chicken chicken 3; day 2; diet=StandardDiet; sample=FecalPellet N.D. -0.1 -6.8 -0.1 N.D.
mouse coculture cage1; mouse1; day2; diet=StandardDiet; sample=FecalPellet; coculture=Btheta_VPI5482 N.D. -0.0 -7.0 +0.1 N.D.
mouse coculture cage1; mouse3; day4; diet=StandardDiet; sample=FecalPellet; coculture=Btheta_VPI5482 N.D. +0.3 -7.0 -0.2 N.D.
mouse coculture cage1; mouse2; day3; diet=StandardDiet; sample=FecalPellet; coculture=Btheta_VPI5482 N.D. +0.2 -7.0 +0.0 N.D.
mouse coculture cage1; mouse2; day5; diet=StandardDiet; sample=FecalPellet; coculture=Btheta_VPI5482 N.D. +0.2 -6.5 -0.5 N.D.
mouse coculture cage1; mouse3; day2; diet=StandardDiet; sample=FecalPellet; coculture=Btheta_VPI5482 N.D. +0.0 -6.8 +0.1 N.D.
chicken chicken 10; day 4; diet=StandardDiet; sample=FecalPellet N.D. -0.1 -6.7 +0.1 N.D.
chicken chicken 10; day 5; diet=StandardDiet; sample=FecalPellet N.D. +0.1 -6.4 -0.1 N.D.
chicken chicken 3; day 3; diet=StandardDiet; sample=FecalPellet N.D. +0.0 -6.6 +0.3 N.D.
mouse coculture cage1; mouse1; day5; diet=StandardDiet; sample=FecalPellet; coculture=Btheta_VPI5482 N.D. +0.1 -6.3 +0.0 N.D.
chicken coculture chicken 4; day 3; diet=StandardDiet; sample=FecalPellet; coculture_with=Bacteroides thetaiotaomicron N.D. +0.2 -6.2 +0.1 N.D.
mouse coculture cage1; mouse3; day5; diet=StandardDiet; sample=FecalPellet; coculture=Btheta_VPI5482 N.D. +0.5 -5.8 -0.4 N.D.
mouse diet=StandardDiet2; sample=FecalPellet; mouse16; day2 N.D. -0.0 -5.8 +0.2 N.D.
chicken chicken 2; day 5; diet=StandardDiet; sample=FecalPellet N.D. +0.0 -5.9 +0.3 N.D.
mouse coculture cage1; mouse1; day4; diet=StandardDiet; sample=FecalPellet; coculture=Btheta_VPI5482 N.D. +0.2 -5.6 -0.1 N.D.
mouse diet=StandardDiet2; sample=FecalPellet; mouse16; day3 N.D. -0.2 -5.5 +0.3 N.D.
chicken chicken 5; day 7; diet=StandardDiet; sample=FecalPellet N.D. +0.3 -5.9 +0.2 N.D.
chicken coculture chicken 4; day 4; diet=StandardDiet; sample=FecalPellet; coculture_with=Bacteroides thetaiotaomicron N.D. +0.5 -6.0 +0.2 N.D.
mouse diet=StandardDiet2; sample=FecalPellet; mouse17; day2 N.D. +0.3 -5.8 +0.3 N.D.
chicken chicken 5; day 6; diet=StandardDiet; sample=FecalPellet N.D. +0.2 -5.5 +0.1 N.D.
mouse diet=StandardDiet; sample=FecalPellet; mouse4; day3 N.D. +0.2 -5.5 +0.2 N.D.
mouse diet=StandardDiet; sample=FecalPellet; mouse3; day3 N.D. +0.1 -5.5 +0.5 N.D.
mouse diet=StandardDiet; sample=FecalPellet; mouse5; day3 N.D. +0.3 -5.6 +0.5 N.D.
mouse diet=StandardDiet; sample=FecalPellet; mouse1; day2 N.D. +0.1 -5.6 +0.8 N.D.
mouse diet=StandardDiet2; sample=FecalPellet; mouse17; day3 N.D. +0.5 -5.4 +0.7 N.D.
mouse diet=StandardDiet; sample=FecalPellet; mouse2; day3 N.D. +0.3 -5.1 +0.6 N.D.
remove
BBR_RS16480
plot		 remove
BBR_RS16485
plot		 remove
BBR_RS16490		 remove
BBR_RS16495
plot		 remove
BBR_RS16500
plot