Fitness for 5 genes in Bifidobacterium breve UCC2003

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 747 experiments or choose conditions or try the comparative fitness browser

500 ntBBR_RS15155 and BBR_RS15160 are separated by 18 nucleotidesBBR_RS15160 and BBR_RS15165 overlap by 11 nucleotidesBBR_RS15165 and BBR_RS15170 are separated by 24 nucleotidesBBR_RS15170 and BBR_RS15175 are separated by 1 nucleotides BBR_RS15155: BBR_RS15155 - histidine triad nucleotide-binding protein, at 1,168,264 to 1,168,602 _RS15155 BBR_RS15160: BBR_RS15160 - PhoH family protein, at 1,168,621 to 1,169,805 _RS15160 BBR_RS15165: BBR_RS15165 - rRNA maturation RNase YbeY, at 1,169,795 to 1,170,346 _RS15165 BBR_RS15170: BBR_RS15170 - HlyC/CorC family transporter, at 1,170,371 to 1,171,804 _RS15170 BBR_RS15175: BBR_RS15175 - GTPase Era, at 1,171,806 to 1,172,813 _RS15175
Group Condition BBR_RS15155 BBR_RS15160 BBR_RS15165 BBR_RS15170 BBR_RS15175
nutrient dropout control CDM1 -1.2 -0.6 N.D. -5.3 N.D.
chicken coculture chicken 4; day 3; diet=StandardDiet; sample=FecalPellet; coculture_with=Bacteroides thetaiotaomicron -3.4 -2.3 N.D. -1.2 N.D.
nutrient dropout CDM1 without Phenylalanine -1.3 -1.1 N.D. -4.4 N.D.
nutrient dropout CDM1 without Glycine -1.4 -0.1 N.D. -5.0 N.D.
chicken coculture chicken 4; day 4; diet=StandardDiet; sample=FecalPellet; coculture_with=Bacteroides thetaiotaomicron -1.1 -3.2 N.D. -2.2 N.D.
chicken chicken 2; day 5; diet=StandardDiet; sample=FecalPellet -4.1 -0.9 N.D. -1.3 N.D.
nutrient dropout control CDM1 -1.6 -0.6 N.D. -4.1 N.D.
nutrient dropout CDM1 without Aspartate -0.7 -0.3 N.D. -5.2 N.D.
nutrient dropout CDM1 without Asparagine -0.9 +0.0 N.D. -5.2 N.D.
nutrient dropout CDM1 without Glutamine -1.0 +0.1 N.D. -5.1 N.D.
nutrient dropout CDM1 without Valine -0.6 -0.4 N.D. -4.9 N.D.
nutrient dropout CDM1 without Glutathione -0.3 -0.2 N.D. -5.4 N.D.
nutrient dropout control CDM1 -0.7 -0.2 N.D. -4.9 N.D.
nutrient dropout CDM1 without Threonine -0.5 +0.0 N.D. -5.4 N.D.
nutrient dropout control CDM1 -0.6 -0.5 N.D. -4.7 N.D.
nutrient dropout CDM1 without Tryptophan -1.1 +0.1 N.D. -4.8 N.D.
nutrient dropout CDM1 without Histidine -0.7 -0.3 N.D. -4.8 N.D.
nutrient dropout CDM1 without Pyridoxamine -0.3 -0.3 N.D. -5.1 N.D.
nutrient dropout CDM1 without Tyrosine -0.4 -0.1 N.D. -5.2 N.D.
nutrient dropout CDM1 without Proline -0.2 -0.4 N.D. -5.2 N.D.
nutrient dropout CDM1 without Pantothenate -0.4 -0.5 N.D. -4.8 N.D.
nutrient dropout control CDM1 -1.4 -0.3 N.D. -4.0 N.D.
nutrient dropout CDM1 without Glycine -0.7 -0.7 N.D. -4.2 N.D.
nutrient dropout CDM1 without Lysine -1.3 +0.3 N.D. -4.5 N.D.
nutrient dropout CDM1 without Alanine -0.0 -0.2 N.D. -5.2 N.D.
nutrient dropout control CDM1 -1.0 -0.6 N.D. -3.9 N.D.
nutrient dropout CDM1 without LipoicAcid -0.2 -0.2 N.D. -5.0 N.D.
nutrient dropout CDM1 without Arginine -1.2 +0.1 N.D. -4.2 N.D.
stress Recovery broth with Ciprofloxacin 0.1 mM -4.4 +0.1 N.D. -0.9 N.D.
nutrient dropout CDM1 without Cyanocobalamin +0.1 +0.2 N.D. -5.3 N.D.
remove
BBR_RS15155
plot		 remove
BBR_RS15160
plot		 remove
BBR_RS15165		 remove
BBR_RS15170
plot		 remove
BBR_RS15175
plot