Fitness for 5 genes in Bifidobacterium breve UCC2003

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 747 experiments or choose conditions or try the comparative fitness browser

500 ntBBR_RS14380 and BBR_RS14390 are separated by 244 nucleotidesBBR_RS14390 and BBR_RS14395 are separated by 102 nucleotidesBBR_RS14395 and BBR_RS14400 are separated by 140 nucleotidesBBR_RS14400 and BBR_RS14405 are separated by 143 nucleotides BBR_RS14380: BBR_RS14380 - phosphate acetyltransferase, at 1,000,467 to 1,002,137 _RS14380 BBR_RS14390: BBR_RS14390 - tRNA-Gln, at 1,002,382 to 1,002,455 _RS14390 BBR_RS14395: BBR_RS14395 - ribose-phosphate diphosphokinase, at 1,002,558 to 1,003,580 _RS14395 BBR_RS14400: BBR_RS14400 - acetyltransferase, at 1,003,721 to 1,005,652 _RS14400 BBR_RS14405: BBR_RS14405 - glutamine-hydrolyzing GMP synthase, at 1,005,796 to 1,007,358 _RS14405
Group Condition BBR_RS14380 BBR_RS14390 BBR_RS14395 BBR_RS14400 BBR_RS14405
mouse diet=HighFatHighSugar; sample=FecalPellet; mouse14; day2 -4.4 N.D. N.D. -0.8 N.D.
mouse diet=StandardDiet; sample=FecalPellet; treatment=Methotrexate; mouse16; day6 -3.5 N.D. N.D. -1.0 N.D.
mouse diet=HighFatHighSugar; sample=FecalPellet; mouse13; day2 -2.5 N.D. N.D. -1.6 N.D.
mouse diet=StandardDiet; sample=FecalPellet; treatment=Methotrexate; mouse17; day6 -3.0 N.D. N.D. -1.1 N.D.
mouse diet=StandardDiet; sample=FecalPellet; treatment=Methotrexate; mouse18; day6 -2.9 N.D. N.D. -0.9 N.D.
carbon source reconstituted MRS with L-Fucose 30 mM -2.6 N.D. N.D. -1.0 N.D.
mouse diet=HighFatHighSugar; sample=FecalPellet; mouse12; day2 -2.9 N.D. N.D. -0.7 N.D.
mouse diet=HighFatHighSugar; sample=FecalPellet; mouse12; day1 -2.5 N.D. N.D. -1.0 N.D.
mouse diet=HighFatHighSugar; sample=FecalPellet; mouse15; day1 -2.4 N.D. N.D. -1.0 N.D.
mouse diet=HighFatHighSugar; sample=FecalPellet; mouse14; day1 -2.7 N.D. N.D. -0.8 N.D.
mouse diet=StandardDiet; sample=FecalPellet; treatment=Methotrexate; mouse18; day5 -2.1 N.D. N.D. -1.3 N.D.
mouse diet=StandardDiet; sample=FecalPellet; treatment=Methotrexate; mouse16; day5 -2.0 N.D. N.D. -1.2 N.D.
mouse diet=StandardDiet; sample=FecalPellet; mouse1; day1 -2.3 N.D. N.D. -0.9 N.D.
mouse diet=HighFatHighSugar; sample=FecalPellet; mouse13; day3 -1.5 N.D. N.D. -1.6 N.D.
mouse diet=StandardDiet; sample=FecalPellet; treatment=Methotrexate; mouse17; day5 -1.9 N.D. N.D. -1.1 N.D.
mouse diet=HighFatHighSugar; sample=FecalPellet; mouse15; day3 -1.5 N.D. N.D. -1.5 N.D.
mouse diet=HighFatHighSugar; sample=FecalPellet; mouse15; day2 -2.0 N.D. N.D. -0.8 N.D.
mouse mouse 12; day 1; diet=HighFatHighSugar; sample=FecalPellet -1.4 N.D. N.D. -1.4 N.D.
mouse diet=HighFatHighSugar; sample=FecalPellet; mouse13; day1 -2.0 N.D. N.D. -0.7 N.D.
mouse diet=StandardDiet; sample=FecalPellet; treatment=Methotrexate; mouse16; day4 -1.5 N.D. N.D. -1.1 N.D.
carbon source reconstituted MRS with Inulin 0.8 mM -2.4 N.D. N.D. -0.2 N.D.
mouse diet=StandardDiet; sample=FecalPellet; treatment=Methotrexate; mouse18; day4 -1.6 N.D. N.D. -1.0 N.D.
mouse preculture cage3; mouse3; day5; diet=PolysaccharideDeficient; sample=FecalPellet; coculture=Btheta_VPI5482; stagger=24hrs -1.9 N.D. N.D. -0.7 N.D.
mouse mouse 11; day 1; diet=HighFatHighSugar; sample=FecalPellet -1.7 N.D. N.D. -0.8 N.D.
mouse diet=HighFatHighSugar; sample=FecalPellet; mouse11; day1 -1.5 N.D. N.D. -0.9 N.D.
mouse diet=HighFatHighSugar; sample=FecalPellet; mouse14; day3 -1.6 N.D. N.D. -0.8 N.D.
stress Recovery broth with Cefaclor 0.003 mM +0.7 N.D. N.D. +1.9 N.D.
stress Recovery broth with Aztreonam 0.2 mM +0.7 N.D. N.D. +2.0 N.D.
stress Recovery broth with Penicillin G 2e-04 mM +0.8 N.D. N.D. +1.9 N.D.
stress Recovery broth with Ticarcillin 4e-04 mM +0.9 N.D. N.D. +1.9 N.D.
remove
BBR_RS14380
plot		 remove
BBR_RS14390
plot		 remove
BBR_RS14395		 remove
BBR_RS14400
plot		 remove
BBR_RS14405
plot