Fitness for 5 genes in Bifidobacterium breve UCC2003

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 747 experiments or choose conditions or try the comparative fitness browser

500 ntBBR_RS20690 and BBR_RS12315 are separated by 115 nucleotidesBBR_RS12315 and BBR_RS12320 are separated by 248 nucleotidesBBR_RS12320 and BBR_RS12325 are separated by 210 nucleotidesBBR_RS12325 and BBR_RS12330 are separated by 234 nucleotides BBR_RS20690: BBR_RS20690 - hypothetical protein, at 513,935 to 514,135 _RS20690 BBR_RS12315: BBR_RS12315 - cation transporter, at 514,251 to 515,159 _RS12315 BBR_RS12320: BBR_RS12320 - cysteine--tRNA ligase, at 515,408 to 517,057 _RS12320 BBR_RS12325: BBR_RS12325 - type 1 glutamine amidotransferase, at 517,268 to 517,996 _RS12325 BBR_RS12330: BBR_RS12330 - ABC transporter ATP-binding protein, at 518,231 to 520,444 _RS12330
Group Condition BBR_RS20690 BBR_RS12315 BBR_RS12320 BBR_RS12325 BBR_RS12330
nutrient dropout CDM1 without Phenylalanine -4.9 -5.0 N.D. +0.3 +0.0
nutrient dropout CDM1 without Glycine -2.7 -4.3 N.D. -0.5 -0.2
mouse diet=StandardDiet; sample=FecalPellet; mouse4; day5 -4.4 -2.8 N.D. +0.1 +0.0
mouse diet=StandardDiet; sample=FecalPellet; treatment=Methotrexate; mouse16; day6 -3.9 -3.5 N.D. +0.3 +0.1
nutrient dropout CDM1 without Adenine -5.6 -1.2 N.D. +0.7 -0.5
mouse diet=StandardDiet; sample=FecalPellet; treatment=Methotrexate; mouse17; day6 -3.9 -3.3 N.D. +0.5 +0.2
nutrient dropout CDM1 without Phenylalanine -1.9 -5.0 N.D. +0.3 +0.2
mouse diet=StandardDiet; sample=FecalPellet; treatment=Methotrexate; mouse17; day5 -4.2 -2.9 N.D. +0.5 +0.2
nutrient dropout CDM1 with Glycine Leucine Cysteine Methionine Glutamate as the only aminos -2.0 -5.4 N.D. +1.3 -0.1
mouse diet=StandardDiet; sample=FecalPellet; treatment=Methotrexate; mouse17; day3 -5.4 -1.1 N.D. +0.4 +0.1
mouse diet=StandardDiet; sample=FecalPellet; mouse1; day3 -6.9 +0.4 N.D. +0.5 +0.0
mouse diet=StandardDiet; sample=FecalPellet; mouse1; day5 -2.7 -3.1 N.D. +0.3 +0.2
mouse diet=StandardDiet; sample=FecalPellet; mouse5; day5 -4.2 -1.6 N.D. +0.4 +0.3
mouse diet=StandardDiet; sample=FecalPellet; treatment=Methotrexate; mouse16; day5 -2.0 -3.5 N.D. +0.7 -0.1
mouse diet=StandardDiet; sample=FecalPellet; treatment=Methotrexate; mouse18; day5 -2.9 -2.4 N.D. +0.5 +0.0
mouse diet=HighFatHighSugar; sample=FecalPellet; mouse11; day3 -2.7 -0.7 N.D. -0.9 -0.4
mouse diet=StandardDiet; sample=FecalPellet; mouse5; day6 -3.2 -2.1 N.D. +0.4 +0.4
stress Recovery broth with Thioridazine 0.1 mM -4.1 -0.1 N.D. -0.3 +0.0
nutrient dropout CDM1 with Glycine Leucine Cysteine Methionine Glutamate as the only aminos -0.2 -4.9 N.D. +0.8 +0.0
mouse diet=HighFatHighSugar; sample=FecalPellet; mouse14; day3 -3.7 -0.5 N.D. -0.2 +0.2
nutrient dropout CDM1 without Valine -1.6 -2.4 N.D. +0.2 -0.3
carbon source reconstituted MRS with Difucosyllactose 7.9 mM -3.8 -0.3 N.D. +0.0 +0.2
nutrient dropout CDM1 without Isoleucine -2.9 -1.0 N.D. +0.3 -0.3
mouse diet=StandardDiet; sample=FecalPellet; mouse3; day4 -2.0 -2.2 N.D. +0.2 +0.2
mouse diet=HighFatHighSugar; sample=FecalPellet; mouse15; day3 -2.7 -0.8 N.D. -0.5 +0.3
mouse diet=StandardDiet; sample=FecalPellet; mouse2; day4 -1.6 -2.5 N.D. +0.2 +0.3
mouse diet=StandardDiet; sample=FecalPellet; mouse3; day5 -1.2 -3.4 N.D. +0.9 +0.2
nutrient dropout CDM1 without Pantothenate -2.9 -0.7 N.D. +0.6 -0.4
mouse diet=StandardDiet; sample=FecalPellet; treatment=Methotrexate; mouse18; day6 -0.6 -3.7 N.D. +0.9 -0.0
nutrient dropout CDM1 without Glycine +0.7 -3.3 N.D. +0.3 -0.0
remove
BBR_RS20690
plot		 remove
BBR_RS12315
plot		 remove
BBR_RS12320		 remove
BBR_RS12325
plot		 remove
BBR_RS12330
plot