Fitness for 5 genes in Bifidobacterium breve UCC2003

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 747 experiments or choose conditions or try the comparative fitness browser

500 ntBBR_RS11980 and BBR_RS11985 are separated by 104 nucleotidesBBR_RS11985 and BBR_RS11990 are separated by 221 nucleotidesBBR_RS11990 and BBR_RS11995 are separated by 344 nucleotidesBBR_RS11995 and BBR_RS12000 are separated by 97 nucleotides BBR_RS11980: BBR_RS11980 - phage integrase, at 440,392 to 441,216 _RS11980 BBR_RS11985: BBR_RS11985 - tRNA-Met, at 441,321 to 441,397 _RS11985 BBR_RS11990: BBR_RS11990 - homoserine O-succinyltransferase, at 441,619 to 442,653 _RS11990 BBR_RS11995: BBR_RS11995 - ATP synthase F0 subunit A, at 442,998 to 443,807 _RS11995 BBR_RS12000: BBR_RS12000 - ATP synthase subunit C, at 443,905 to 444,132 _RS12000
Group Condition BBR_RS11980 BBR_RS11985 BBR_RS11990 BBR_RS11995 BBR_RS12000
chicken coculture chicken 4; day 4; diet=StandardDiet; sample=FecalPellet; coculture_with=Bacteroides thetaiotaomicron -1.0 N.D. -4.6 N.D. N.D.
mouse coculture cage1; mouse1; day5; diet=StandardDiet; sample=FecalPellet; coculture=Btheta_VPI5482 -0.0 N.D. -5.0 N.D. N.D.
chicken chicken 1; day 2; diet=StandardDiet; sample=FecalPellet -0.5 N.D. -4.3 N.D. N.D.
mouse coculture cage1; mouse2; day5; diet=StandardDiet; sample=FecalPellet; coculture=Btheta_VPI5482 -0.0 N.D. -4.7 N.D. N.D.
mouse coculture cage1; mouse3; day5; diet=StandardDiet; sample=FecalPellet; coculture=Btheta_VPI5482 +0.0 N.D. -4.6 N.D. N.D.
chicken coculture chicken 4; day 3; diet=StandardDiet; sample=FecalPellet; coculture_with=Bacteroides thetaiotaomicron -0.5 N.D. -4.0 N.D. N.D.
chicken chicken 2; day 6; diet=StandardDiet; sample=FecalPellet -0.7 N.D. -3.6 N.D. N.D.
chicken coculture chicken 2; day 7; diet=StandardDiet; sample=FecalPellet; coculture_with=Bacteroides thetaiotaomicron -0.5 N.D. -3.6 N.D. N.D.
mouse preculture cage3; mouse1; day5; diet=PolysaccharideDeficient; sample=FecalPellet; coculture=Btheta_VPI5482; stagger=24hrs +0.2 N.D. -4.1 N.D. N.D.
mouse preculture cage3; mouse1; day4; diet=PolysaccharideDeficient; sample=FecalPellet; coculture=Btheta_VPI5482; stagger=24hrs -0.2 N.D. -3.5 N.D. N.D.
chicken chicken 2; day 5; diet=StandardDiet; sample=FecalPellet -0.6 N.D. -3.1 N.D. N.D.
nutrient dropout CDM1 without Methionine -0.9 N.D. -2.7 N.D. N.D.
mouse coculture cage1; mouse3; day4; diet=StandardDiet; sample=FecalPellet; coculture=Btheta_VPI5482 +0.0 N.D. -3.6 N.D. N.D.
mouse preculture cage3; mouse3; day5; diet=PolysaccharideDeficient; sample=FecalPellet; coculture=Btheta_VPI5482; stagger=24hrs -0.1 N.D. -3.3 N.D. N.D.
mouse preculture cage3; mouse3; day4; diet=PolysaccharideDeficient; sample=FecalPellet; coculture=Btheta_VPI5482; stagger=24hrs -0.1 N.D. -3.3 N.D. N.D.
mouse coculture cage1; mouse2; day4; diet=StandardDiet; sample=FecalPellet; coculture=Btheta_VPI5482 -0.1 N.D. -3.2 N.D. N.D.
mouse preculture cage3; mouse1; day3; diet=PolysaccharideDeficient; sample=FecalPellet; coculture=Btheta_VPI5482; stagger=24hrs -0.0 N.D. -3.2 N.D. N.D.
chicken chicken 5; day 7; diet=StandardDiet; sample=FecalPellet -0.2 N.D. -2.9 N.D. N.D.
mouse preculture cage3; mouse3; day3; diet=PolysaccharideDeficient; sample=FecalPellet; coculture=Btheta_VPI5482; stagger=24hrs -0.0 N.D. -3.0 N.D. N.D.
chicken chicken 9; day 2; diet=StandardDiet; sample=FecalPellet -0.3 N.D. -2.7 N.D. N.D.
nutrient dropout CDM1 without Methionine -0.6 N.D. -2.2 N.D. N.D.
mouse coculture cage1; mouse3; day3; diet=StandardDiet; sample=FecalPellet; coculture=Btheta_VPI5482 +0.0 N.D. -2.5 N.D. N.D.
chicken chicken 5; day 6; diet=StandardDiet; sample=FecalPellet -0.2 N.D. -2.3 N.D. N.D.
mouse preculture cage3; mouse2; day3; diet=PolysaccharideDeficient; sample=FecalPellet; coculture=Btheta_VPI5482; stagger=24hrs -0.2 N.D. -2.2 N.D. N.D.
mouse coculture cage1; mouse2; day3; diet=StandardDiet; sample=FecalPellet; coculture=Btheta_VPI5482 -0.0 N.D. -2.3 N.D. N.D.
mouse coculture cage1; mouse1; day4; diet=StandardDiet; sample=FecalPellet; coculture=Btheta_VPI5482 +0.1 N.D. -2.2 N.D. N.D.
mouse coculture cage1; mouse1; day3; diet=StandardDiet; sample=FecalPellet; coculture=Btheta_VPI5482 +0.0 N.D. -2.1 N.D. N.D.
chicken chicken 3; day 3; diet=StandardDiet; sample=FecalPellet -0.3 N.D. -1.7 N.D. N.D.
chicken chicken 21; day 7; diet=StandardDiet; sample=Small_intestine -0.8 N.D. +2.3 N.D. N.D.
chicken chicken 21; day 7; diet=StandardDiet; sample=Cecum -0.7 N.D. +2.3 N.D. N.D.
remove
BBR_RS11980
plot		 remove
BBR_RS11985
plot		 remove
BBR_RS11990		 remove
BBR_RS11995
plot		 remove
BBR_RS12000
plot