Fitness for 5 genes in Acidovorax sp. GW101-3H11

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500 ntAc3H11_973 and Ac3H11_974 are separated by 74 nucleotidesAc3H11_974 and Ac3H11_975 are separated by 56 nucleotidesAc3H11_975 and Ac3H11_976 are separated by 192 nucleotidesAc3H11_976 and Ac3H11_977 are separated by 71 nucleotides Ac3H11_973 - Putative analog of CcoH, COG3198, at 96,334 to 96,609 _973 Ac3H11_974 - Probable transmembrane protein, at 96,684 to 96,977 _974 Ac3H11_975 - transcriptional regulator, Crp/Fnr family, at 97,034 to 97,756 _975 Ac3H11_976 - Coproporphyrinogen III oxidase, oxygen-independent (EC 1.3.99.22), at 97,949 to 99,331 _976 Ac3H11_977 - Heavy-metal-associated domain (N-terminus) and membrane-bounded cytochrome biogenesis cycZ-like domain, possible membrane copper tolerance protein, at 99,403 to 100,080 _977
Group Condition Ac3H11_973 Ac3H11_974 Ac3H11_975 Ac3H11_976 Ac3H11_977
motility inner cut, R2A soft agar motility assay -0.5 +0.4 N.D. +0.1 -4.1
carbon source a-Ketoglutaric (C) -0.3 +0.1 N.D. -0.2 -3.6
motility inner cut, R2A soft agar motility assay -0.2 -0.1 N.D. -0.2 -2.8
carbon source L-Arabinose (C) -0.9 +0.1 N.D. -0.0 -2.4
temperature LB 30C -1.0 +0.1 N.D. -0.1 -2.1
carbon source D-Lactate (C) -0.6 +0.2 N.D. +0.0 -2.6
carbon source D-Lactate (C) -1.2 +0.2 N.D. -0.0 -1.4
stress Nickel (II) chloride 0.8 mM -1.0 -0.3 N.D. -0.0 -1.0
carbon source pyruvate (C) -0.0 +0.1 N.D. -0.1 -2.0
carbon source a-Ketoglutaric (C) +0.5 -0.2 N.D. -0.3 -1.8
temperature LB 30C -0.7 +0.1 N.D. -0.1 -1.0
carbon source D-Galactose (C) -0.4 +0.1 N.D. -0.1 -1.3
carbon source L-Arabinose (C) -0.5 +0.1 N.D. -0.0 -1.3
lb LB -0.7 +0.1 N.D. +0.1 -1.1
carbon source D,L-Lactate (C) -0.4 +0.2 N.D. +0.0 -1.2
stress Cisplatin 0.0025 mg/ml -0.0 +0.3 N.D. +0.5 -1.8
stress Cisplatin 0.005 mg/ml +0.2 +0.1 N.D. +0.5 -1.6
stress D-Cycloserine 0.05 mg/ml +0.5 +0.3 N.D. -0.3 -0.6
carbon source L-Asparagine (C) -0.6 +0.1 N.D. -0.3 +0.9
nitrogen source D-Alanine (N) +0.7 -0.7 N.D. -0.3 +0.7
pH LB, pH10 -0.5 -0.1 N.D. +0.3 +1.3
stress Doxycycline hyclate 0.000025 mg/ml +0.4 -0.1 N.D. -0.3 +1.1
nitrogen source Uridine (N) +1.0 -0.0 N.D. -0.4 +0.6
nitrogen source L-Threonine (N) +1.0 -0.1 N.D. -0.3 +1.0
stress Paraquat dichloride 0.01 mg/ml -0.1 +0.4 N.D. +0.7 +0.7
stress Zinc 1 mM -0.1 +0.0 N.D. +0.8 +1.0
stress Sisomicin 0.001 mg/ml +0.7 -0.2 N.D. +0.7 +0.7
stress copper (II) chloride 1 mM +0.7 +0.2 N.D. +0.8 +1.4
stress copper (II) chloride 2 mM +1.0 +0.2 N.D. +0.7 +1.7
nitrogen source Ammonium chloride (N) +2.0 +0.3 N.D. -0.6 +2.5
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