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Protein
Homologs
Fitness for 5 genes in
Acidovorax sp. GW101-3H11
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500 nt
Ac3H11_664 and Ac3H11_665 are separated by 202 nucleotides
Ac3H11_665 and Ac3H11_666 are separated by 185 nucleotides
Ac3H11_666 and Ac3H11_667 are separated by 59 nucleotides
Ac3H11_667 and Ac3H11_668 overlap by 4 nucleotides
Ac3H11_664 - 5'-methylthioadenosine nucleosidase (EC 3.2.2.16) @ S-adenosylhomocysteine nucleosidase (EC 3.2.2.9), at 21,379 to 22,134
_664
Ac3H11_665 - Magnesium and cobalt transport protein CorA, at 22,337 to 23,323
_665
Ac3H11_666 - Bacteriophage-related DNA polymerase, at 23,509 to 24,279
_666
Ac3H11_667 - Ribosomal-protein-S18p-alanine acetyltransferase (EC 2.3.1.-), at 24,339 to 24,842
_667
Ac3H11_668 - TsaB protein, required for threonylcarbamoyladenosine (t(6)A) formation in tRNA, at 24,839 to 25,576
_668
Group
Condition
Ac3H11
_664
Ac3H11
_665
Ac3H11
_666
Ac3H11
_667
Ac3H11
_668
carbon source
D-Gluconic Acid (C)
+0.4
N.D.
N.D.
-1.6
N.D.
stress
Sisomicin 0.001 mg/ml
+0.0
N.D.
N.D.
-1.1
N.D.
stress
Paraquat dichloride 0.01 mg/ml
+0.4
N.D.
N.D.
-1.5
N.D.
nitrogen source
L-tyrosine (N)
-0.0
N.D.
N.D.
-0.9
N.D.
carbon source
D,L-Lactate (C)
-0.0
N.D.
N.D.
-0.9
N.D.
lb
LB
-1.1
N.D.
N.D.
+0.2
N.D.
stress
Bacitracin 0.032 mg/ml
+0.1
N.D.
N.D.
-0.9
N.D.
phage
phage 93.2
+0.3
N.D.
N.D.
-1.0
N.D.
carbon source
D,L-Lactate (C)
-0.3
N.D.
N.D.
-0.4
N.D.
stress
Nickel (II) chloride 0.8 mM
-0.2
N.D.
N.D.
-0.5
N.D.
carbon source
D-Fructose (C)
+0.0
N.D.
N.D.
-0.7
N.D.
carbon source
D-Gluconic Acid (C)
+0.5
N.D.
N.D.
-1.1
N.D.
carbon source
succinate (C)
+0.1
N.D.
N.D.
-0.7
N.D.
carbon source
D-Ribose (C)
+0.1
N.D.
N.D.
-0.7
N.D.
stress
Aluminum chloride 2 mM
+0.1
N.D.
N.D.
-0.7
N.D.
stress
Phosphomycin 0.02 mg/ml
+0.2
N.D.
N.D.
-0.7
N.D.
carbon source
pyruvate (C)
+0.4
N.D.
N.D.
-0.8
N.D.
carbon source
D-Lactate (C)
+0.1
N.D.
N.D.
-0.6
N.D.
carbon source
D-Lactate (C)
+0.3
N.D.
N.D.
-0.7
N.D.
carbon source
D-Galactose (C)
+0.2
N.D.
N.D.
-0.6
N.D.
stress
Cobalt chloride 0.32 mM
+0.2
N.D.
N.D.
-0.6
N.D.
carbon source
L-Lactate (C)
+0.2
N.D.
N.D.
-0.5
N.D.
stress
Bacitracin 0.008 mg/ml
+0.4
N.D.
N.D.
-0.7
N.D.
carbon source
D-Fructose (C)
+0.3
N.D.
N.D.
-0.6
N.D.
stress
nitrate 45 mM
+0.3
N.D.
N.D.
-0.5
N.D.
lb
LB
+0.4
N.D.
N.D.
-0.5
N.D.
stress
2-Furfuraldehyde 0.06 vol%
+0.4
N.D.
N.D.
-0.5
N.D.
stress
Cisplatin 0.005 mg/ml
+0.6
N.D.
N.D.
-0.3
N.D.
stress
D-Cycloserine 0.05 mg/ml
+0.4
N.D.
N.D.
+0.3
N.D.
nitrogen source
L-Isoleucine (N)
+0.4
N.D.
N.D.
+0.4
N.D.
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