Fitness for 5 genes in Acidovorax sp. GW101-3H11

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500 ntAc3H11_539 and Ac3H11_540 are separated by 136 nucleotidesAc3H11_540 and Ac3H11_541 are separated by 400 nucleotidesAc3H11_541 and Ac3H11_542 are separated by 67 nucleotidesAc3H11_542 and Ac3H11_543 overlap by 4 nucleotides Ac3H11_539 - Phosphoribosylformylglycinamidine synthase, synthetase subunit (EC 6.3.5.3) / Phosphoribosylformylglycinamidine synthase, glutamine amidotransferase subunit (EC 6.3.5.3), at 240,792 to 244,799 _539 Ac3H11_540 - Membrane protein, putative, at 244,936 to 245,922 _540 Ac3H11_541 - Outer membrane protein W precursor, at 246,323 to 246,913 _541 Ac3H11_542 - Lysine exporter protein (LYSE/YGGA), at 246,981 to 247,625 _542 Ac3H11_543 - hypothetical protein, at 247,622 to 247,807 _543
Group Condition Ac3H11_539 Ac3H11_540 Ac3H11_541 Ac3H11_542 Ac3H11_543
motility inner cut, R2A soft agar motility assay N.D. -0.1 +0.0 +0.1 -3.9
stress Cisplatin 0.0025 mg/ml N.D. -2.6 -0.2 +0.4 -0.4
motility inner cut, R2A soft agar motility assay N.D. -0.3 -0.7 +0.1 -1.0
pH LB, pH10 N.D. -0.3 +0.1 -1.2 -0.3
stress Cobalt chloride 0.32 mM N.D. -0.6 +0.2 -0.4 -0.6
stress sodium fluoride 25 mM N.D. -0.7 +0.1 +0.6 -0.4
phage phage 93.1 N.D. +0.3 -0.2 +0.8 -0.9
stress nitrate 100 mM N.D. -0.3 +0.5 -0.7 +0.6
stress Paraquat dichloride 0.01 mg/ml N.D. -1.5 +0.2 +1.1 +0.4
stress D-Cycloserine 0.05 mg/ml N.D. +0.8 -0.1 +0.4 -0.9
lb LB N.D. -0.9 +0.5 +0.5 +0.2
nitrogen source L-Alanine (N) N.D. +0.4 +0.0 -1.1 +1.0
stress Polymyxin B sulfate 0.0001 mg/ml N.D. +0.6 +0.1 -0.8 +0.6
lb LB N.D. +0.8 +0.1 +0.2 -0.7
stress Nickel (II) chloride 0.6 mM N.D. -0.9 -0.2 +0.8 +0.7
carbon source succinate (C) N.D. -0.1 +0.0 -0.7 +1.4
carbon source D-Fructose (C) N.D. +0.5 +0.1 -0.5 +0.6
stress Phosphomycin 0.02 mg/ml N.D. +0.6 -0.4 +0.3 +0.4
pH LB, pH10 N.D. +0.7 -0.3 +0.9 -0.3
stress Cisplatin 0.005 mg/ml N.D. -0.4 +0.3 +0.8 +0.3
stress perchlorate 10 mM N.D. +0.3 -0.1 +0.4 +0.7
carbon source L-Asparagine (C) N.D. -0.1 +0.3 +0.9 +0.4
stress Sisomicin 0.001 mg/ml N.D. +0.6 +0.4 +0.7 -0.1
stress Chlorite 0.1 mM N.D. +0.4 +0.2 +1.0 +0.2
phage phage 93.1 N.D. +1.1 +0.1 +0.6 +0.1
nitrogen source D-Alanine (N) N.D. +0.8 +0.2 +0.6 +0.3
lb LB N.D. +0.9 +0.4 +0.8 -0.1
stress Bacitracin 0.008 mg/ml N.D. +0.2 +0.1 +0.7 +1.0
nitrogen source Ammonium chloride (N) N.D. +1.0 +0.1 +0.0 +1.1
stress copper (II) chloride 2 mM N.D. +0.8 +0.2 +0.7 +0.7
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