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Cofit
Protein
Homologs
Fitness for 5 genes in
Acidovorax sp. GW101-3H11
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Ac3H11_509 and Ac3H11_510 are separated by 316 nucleotides
Ac3H11_510 and Ac3H11_511 are separated by 131 nucleotides
Ac3H11_511 and Ac3H11_512 are separated by 325 nucleotides
Ac3H11_512 and Ac3H11_513 are separated by 85 nucleotides
Ac3H11_509 - Inorganic pyrophosphatase (EC 3.6.1.1), at 207,160 to 207,696
_509
Ac3H11_510 - Methyl-accepting chemotaxis protein I (serine chemoreceptor protein), at 208,013 to 210,037
_510
Ac3H11_511 - FIG00933650: hypothetical protein, at 210,169 to 210,975
_511
Ac3H11_512 - Positive regulator of CheA protein activity (CheW), at 211,301 to 211,840
_512
Ac3H11_513 - Methyl-accepting chemotaxis protein I (serine chemoreceptor protein), at 211,926 to 213,914
_513
Group
Condition
Ac3H11
_509
Ac3H11
_510
Ac3H11
_511
Ac3H11
_512
Ac3H11
_513
stress
Cisplatin 0.005 mg/ml
N.D.
-0.3
+0.2
-0.2
-1.1
stress
Tetracycline 0.0001 mg/ml
N.D.
-0.0
+0.0
-0.7
+0.0
nitrogen source
Ammonium chloride (N)
N.D.
-0.2
-0.4
-0.2
+0.1
stress
Sisomicin 0.001 mg/ml
N.D.
-0.3
-0.2
-0.3
+0.1
stress
Nickel (II) chloride 0.6 mM
N.D.
-0.3
+0.1
-0.4
+0.0
nitrogen source
D-Alanine (N)
N.D.
+0.1
+0.1
-0.7
+0.0
stress
copper (II) chloride 1 mM
N.D.
-0.6
-0.2
+0.5
-0.2
lb
LB
N.D.
+0.1
+0.0
-0.4
-0.3
stress
Cobalt chloride 0.4 mM
N.D.
-0.3
+0.1
+0.2
-0.3
stress
Polymyxin B sulfate 0.0001 mg/ml
N.D.
+0.2
+0.0
-0.3
-0.2
stress
Cobalt chloride 0.32 mM
N.D.
-0.2
+0.2
+0.0
-0.3
lb
LB
N.D.
-0.1
+0.0
-0.4
+0.3
stress
sodium fluoride 50 mM
N.D.
+0.1
+0.3
-0.4
-0.3
carbon source
succinate (C)
N.D.
-0.3
+0.1
+0.2
-0.1
nitrogen source
L-Leucine (N)
N.D.
+0.3
+0.2
-0.1
-0.3
pH
LB, pH10
N.D.
+0.5
+0.2
+0.2
-0.7
phage
phage 93.1
N.D.
+0.4
-0.2
-0.2
+0.3
stress
Chlorite 0.1 mM
N.D.
-0.3
+0.3
+0.5
-0.1
stress
copper (II) chloride 2 mM
N.D.
+0.4
-0.2
+0.4
-0.2
pH
LB, pH10
N.D.
+0.5
+0.1
-0.4
+0.2
nitrogen source
L-Proline (N)
N.D.
+0.3
+0.1
+0.4
-0.1
stress
Fusidic 0.001 mg/ml
N.D.
-0.1
+0.0
+0.3
+0.5
stress
A22 0.025 mg/ml
N.D.
+0.4
+0.1
+0.4
-0.1
pH
LB, pH9
N.D.
+0.3
+0.0
+0.5
-0.1
stress
nitrate 20 mM
N.D.
+0.1
+0.2
+0.2
+0.3
temperature
LB 30C
N.D.
+0.3
+0.1
+0.2
+0.3
carbon source
D-Ribose (C)
N.D.
+0.1
+0.1
+0.2
+0.5
nitrogen source
L-Alanine (N)
N.D.
+0.2
+0.3
+0.1
+0.6
nitrogen source
L-Isoleucine (N)
N.D.
+0.3
+0.4
+0.2
+0.5
motility
inner cut, R2A soft agar motility assay
N.D.
+0.2
+0.3
-0.0
+0.9
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