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Cofit
Protein
Homologs
Fitness for 5 genes in
Acidovorax sp. GW101-3H11
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Ac3H11_4948 and Ac3H11_4949 are separated by 839 nucleotides
Ac3H11_4949 and Ac3H11_4950 are separated by 42 nucleotides
Ac3H11_4950 and Ac3H11_4951 overlap by 26 nucleotides
Ac3H11_4951 and Ac3H11_4952 are separated by 101 nucleotides
Ac3H11_4948 - hypothetical protein, at 114,483 to 114,647
_4948
Ac3H11_4949 - Chromosome (plasmid) partitioning protein ParB, at 115,487 to 116,404
_4949
Ac3H11_4950 - COG0662: Mannose-6-phosphate isomerase, at 116,447 to 116,794
_4950
Ac3H11_4951 - hypothetical protein, at 116,769 to 116,933
_4951
Ac3H11_4952 - FIG00932469: hypothetical protein, at 117,035 to 117,577
_4952
Group
Condition
Ac3H11
_4948
Ac3H11
_4949
Ac3H11
_4950
Ac3H11
_4951
Ac3H11
_4952
stress
Cisplatin 0.005 mg/ml
-0.2
N.D.
-1.7
N.D.
-2.7
stress
Paraquat dichloride 0.01 mg/ml
-0.1
N.D.
-1.7
N.D.
-2.6
lb
LB
+0.1
N.D.
-4.1
N.D.
+0.1
stress
Cisplatin 0.0025 mg/ml
+0.0
N.D.
-1.8
N.D.
-2.0
phage
phage 93.2
-0.3
N.D.
-1.4
N.D.
-1.2
stress
Aluminum chloride 2 mM
-0.0
N.D.
-2.5
N.D.
-0.3
motility
inner cut, R2A soft agar motility assay
-0.1
N.D.
-0.8
N.D.
-1.7
stress
Bacitracin 0.008 mg/ml
-0.1
N.D.
-2.0
N.D.
-0.1
nitrogen source
L-Arginine (N)
+0.0
N.D.
-0.7
N.D.
-1.6
stress
Sisomicin 0.0005 mg/ml
+0.2
N.D.
-1.2
N.D.
-1.1
carbon source
propionate (C)
-0.1
N.D.
-0.2
N.D.
-1.8
pH
LB, pH5
-0.1
N.D.
-1.3
N.D.
-0.6
stress
D-Cycloserine 0.05 mg/ml
-0.3
N.D.
-1.9
N.D.
+0.2
nitrogen source
L-Phenylalanine (N)
-0.1
N.D.
-1.0
N.D.
-0.8
carbon source
D-Fructose (C)
-0.1
N.D.
-0.4
N.D.
-1.4
lb
LB
-0.1
N.D.
-1.4
N.D.
-0.3
stress
Nickel (II) chloride 0.6 mM
+0.1
N.D.
-1.1
N.D.
-0.8
carbon source
L-Lactate (C)
-0.1
N.D.
-0.3
N.D.
-1.3
stress
copper (II) chloride 2 mM
-0.1
N.D.
-0.8
N.D.
-0.8
stress
nitrate 45 mM
-0.1
N.D.
-0.9
N.D.
-0.7
stress
Fusidic 0.001 mg/ml
+0.1
N.D.
-1.4
N.D.
-0.4
stress
Aluminum chloride 4 mM
-0.3
N.D.
-0.3
N.D.
-1.0
stress
Dimethyl Sulfoxide 6 vol%
-0.0
N.D.
-1.3
N.D.
-0.4
stress
Tetracycline 0.00005 mg/ml
-0.2
N.D.
-0.5
N.D.
-1.0
stress
Nickel (II) chloride 0.8 mM
+0.0
N.D.
-0.6
N.D.
-1.1
stress
sodium fluoride 35 mM
-0.2
N.D.
-1.5
N.D.
+0.3
motility
inner cut, R2A soft agar motility assay
+0.1
N.D.
-1.6
N.D.
+0.2
stress
copper (II) chloride 1 mM
+0.0
N.D.
-1.3
N.D.
+0.7
nitrogen source
Ammonium chloride (N)
+0.1
N.D.
-0.4
N.D.
+1.5
motility
inner cut, R2A soft agar motility assay
+0.4
N.D.
+1.0
N.D.
+0.5
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