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Cofit
Protein
Homologs
Fitness for 5 genes in
Acidovorax sp. GW101-3H11
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500 nt
Ac3H11_483 and Ac3H11_484 are separated by 48 nucleotides
Ac3H11_484 and Ac3H11_485 are separated by 68 nucleotides
Ac3H11_485 and Ac3H11_486 are separated by 30 nucleotides
Ac3H11_486 and Ac3H11_487 are separated by 11 nucleotides
Ac3H11_483 - Thioredoxin, at 181,262 to 181,594
_483
Ac3H11_484 - Molybdopterin biosynthesis protein MoeA, at 181,643 to 183,010
_484
Ac3H11_485 - GCN5-related N-acetyltransferase, at 183,079 to 183,678
_485
Ac3H11_486 - Molybdopterin-guanine dinucleotide biosynthesis protein MobA, at 183,709 to 184,347
_486
Ac3H11_487 - Molybdenum cofactor biosynthesis protein MoaA, at 184,359 to 185,513
_487
Group
Condition
Ac3H11
_483
Ac3H11
_484
Ac3H11
_485
Ac3H11
_486
Ac3H11
_487
carbon source
D-Ribose (C)
-0.9
-0.4
-0.1
-0.6
-0.7
stress
2-Furfuraldehyde 0.06 vol%
-0.1
-0.9
-0.0
-0.7
-0.8
stress
Cisplatin 0.0025 mg/ml
-1.8
+0.1
+0.1
-0.6
-0.2
stress
Zinc 1 mM
-0.9
-0.3
+0.1
-0.5
-0.4
stress
Phosphomycin 0.02 mg/ml
-0.9
-0.2
+0.1
-0.6
-0.0
stress
copper (II) chloride 1 mM
+0.1
-0.5
+0.1
-0.8
-0.4
carbon source
D-Glucose (C)
-1.6
+0.1
-0.0
+0.2
-0.0
stress
Sisomicin 0.001 mg/ml
+0.3
-0.6
-0.3
+0.1
-0.8
stress
A22 0.025 mg/ml
-0.9
-0.2
+0.3
-0.2
-0.3
stress
Bacitracin 0.016 mg/ml
+0.5
-0.6
+0.0
-0.7
-0.3
stress
Cisplatin 0.005 mg/ml
+0.8
-0.2
+0.0
-0.8
-0.9
nitrogen source
L-Histidine (N)
+1.3
-0.8
+0.1
-0.9
-0.6
carbon source
pyruvate (C)
-1.4
+0.2
+0.1
+0.3
-0.1
phage
phage 93.1
-1.1
-0.1
+0.1
+0.5
-0.2
stress
nitrate 100 mM
+1.1
-0.2
-0.5
-0.5
-0.6
stress
Bacitracin 0.032 mg/ml
+0.7
-0.5
+0.2
-0.5
-0.3
stress
Bacitracin 0.008 mg/ml
+1.3
-0.1
+0.1
-0.4
-0.4
nitrogen source
L-Proline (N)
+1.1
-0.1
+0.1
-0.5
+0.0
pH
LB, pH10
-1.4
+0.8
+0.2
+0.8
+0.5
stress
syringaldehyde 2.5 mM
+1.2
+0.1
+0.1
+0.3
+0.3
nitrogen source
Uridine (N)
+1.5
+0.3
+0.0
+0.2
+0.2
stress
Nickel (II) chloride 0.6 mM
+0.6
+0.6
+0.1
+0.6
+0.5
nitrogen source
L-Threonine (N)
+1.4
+0.3
+0.1
+0.3
+0.5
nitrogen source
L-Isoleucine (N)
+2.4
-0.1
+0.4
+0.1
-0.1
nitrogen source
L-Alanine (N)
+1.7
+0.5
+0.4
-0.0
+0.2
pH
LB, pH10
+0.5
+0.7
+0.3
+0.8
+0.7
nitrogen source
D-Alanine (N)
+2.5
+0.2
+0.1
+0.3
+0.2
nitrogen source
Ammonium chloride (N)
+3.9
+0.9
+0.3
+0.5
+0.1
nitrogen source
L-tyrosine (N)
+1.5
+1.4
+0.2
+1.7
+1.5
stress
Chlorate 20 mM
+0.7
+3.2
+0.0
+3.4
+3.2
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