Fitness for 5 genes in Acidovorax sp. GW101-3H11

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500 ntAc3H11_4700 and Ac3H11_4701 are separated by 376 nucleotidesAc3H11_4701 and Ac3H11_4702 are separated by 618 nucleotidesAc3H11_4702 and Ac3H11_4703 are separated by 538 nucleotidesAc3H11_4703 and Ac3H11_4704 are separated by 19 nucleotides Ac3H11_4700 - Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-), at 2,996 to 5,284 _4700 Ac3H11_4701 - Type IV pilus biogenesis protein PilM, at 5,661 to 6,740 _4701 Ac3H11_4702 - Type IV pilus biogenesis protein PilO, at 7,359 to 8,021 _4702 Ac3H11_4703 - Type IV pilus biogenesis protein PilQ, at 8,560 to 10,695 _4703 Ac3H11_4704 - EF hand domain/PKD domain protein, at 10,715 to 12,190 _4704
Group Condition Ac3H11_4700 Ac3H11_4701 Ac3H11_4702 Ac3H11_4703 Ac3H11_4704
carbon source D-Gluconic Acid (C) N.D. -0.9 -0.8 -0.5 +0.3
nitrogen source L-tyrosine (N) N.D. -1.0 -0.4 -0.2 -0.3
pH LB, pH10 N.D. -0.5 -0.4 +0.0 -0.9
nitrogen source L-Arginine (N) N.D. -0.8 -0.3 -0.3 -0.2
carbon source D-Gluconic Acid (C) N.D. -0.7 -0.5 -0.5 +0.2
carbon source D-Ribose (C) N.D. -0.4 -0.4 -0.4 -0.1
carbon source succinate (C) N.D. -0.7 -0.2 -0.2 -0.1
carbon source propionate (C) N.D. -0.4 -0.3 -0.4 +0.0
pH LB, pH10 N.D. -0.3 +0.2 +0.1 -0.8
carbon source D-Ribose (C) N.D. -0.4 -0.1 -0.3 +0.0
carbon source succinate (C) N.D. -0.6 -0.1 -0.1 +0.0
stress Cobalt chloride 0.16 mM N.D. -0.2 +0.3 +0.0 -0.4
stress Nickel (II) chloride 0.6 mM N.D. -0.1 +0.2 +0.1 -0.4
lb LB N.D. -0.2 +0.3 +0.2 -0.3
stress Cobalt chloride 0.32 mM N.D. -0.2 +0.4 +0.1 -0.3
pH LB, pH5 N.D. +0.1 +0.0 +0.3 -0.4
stress Fusidic 0.001 mg/ml N.D. +0.0 +0.3 +0.2 -0.3
stress Sisomicin 0.0005 mg/ml N.D. +0.1 +0.5 +0.3 -0.5
lb LB N.D. +0.1 +0.4 +0.3 -0.2
carbon source D-Glucose (C) N.D. +0.2 +0.3 +0.2 +0.2
phage phage 93.2 N.D. +0.4 +0.3 +0.1 +0.1
stress Dimethyl Sulfoxide 6 vol% N.D. +0.1 +0.1 +0.1 +0.6
stress nitrate 100 mM N.D. +0.4 +0.3 +0.2 -0.0
nitrogen source L-Histidine (N) N.D. +0.5 +0.3 +0.2 -0.1
stress Tetracycline 0.00005 mg/ml N.D. +0.4 +0.2 +0.3 +0.0
carbon source L-Glutamine (C) N.D. +0.4 +0.4 +0.3 -0.0
nitrogen source L-Threonine (N) N.D. +0.4 +0.3 +0.3 +0.1
stress Doxycycline hyclate 0.000025 mg/ml N.D. +0.7 +0.3 +0.5 +0.0
stress D-Cycloserine 0.05 mg/ml N.D. +0.5 +0.4 +0.4 +0.4
stress Tetracycline 0.0001 mg/ml N.D. +1.1 +0.7 +0.8 -0.1
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