Fitness for 5 genes in Acidovorax sp. GW101-3H11

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500 ntAc3H11_4677 and Ac3H11_4678 are separated by 81 nucleotidesAc3H11_4678 and Ac3H11_4679 are separated by 122 nucleotidesAc3H11_4679 and Ac3H11_4680 are separated by 65 nucleotidesAc3H11_4680 and Ac3H11_4681 are separated by 385 nucleotides Ac3H11_4677 - D-tyrosyl-tRNA(Tyr) deacylase (EC 3.6.1.n1), at 285,632 to 286,084 _4677 Ac3H11_4678 - membrane protein, putative, at 286,166 to 286,906 _4678 Ac3H11_4679 - probable outer membrane secretion protein - Rhodobacter capsulatus, at 287,029 to 288,759 _4679 Ac3H11_4680 - probable outer membrane secretion protein - Rhodobacter capsulatus, at 288,825 to 290,780 _4680 Ac3H11_4681 - Metal-dependent hydrolase YbeY, involved in rRNA and/or ribosome maturation and assembly, at 291,166 to 291,627 _4681
Group Condition Ac3H11_4677 Ac3H11_4678 Ac3H11_4679 Ac3H11_4680 Ac3H11_4681
pH LB, pH10 -0.4 -0.5 -0.3 -0.2 N.D.
pH LB, pH10 -0.2 -0.7 +0.0 -0.3 N.D.
nitrogen source D-Alanine (N) -0.4 -0.5 -0.1 +0.0 N.D.
carbon source a-Ketoglutaric (C) -0.3 -0.6 -0.0 +0.0 N.D.
stress Cobalt chloride 0.32 mM -0.3 -0.2 -0.1 -0.2 N.D.
carbon source D-Lactate (C) -0.2 -0.5 -0.0 +0.1 N.D.
stress D-Cycloserine 0.05 mg/ml -0.5 +0.2 +0.1 +0.1 N.D.
stress Cisplatin 0.005 mg/ml +0.8 -0.7 -0.2 -0.0 N.D.
stress Cisplatin 0.0025 mg/ml +0.8 -0.7 +0.0 -0.1 N.D.
stress Phosphomycin 0.06 mg/ml +0.4 -0.3 +0.0 -0.1 N.D.
motility inner cut, R2A soft agar motility assay +0.2 -0.3 +0.2 +0.1 N.D.
lb LB +0.0 +0.5 -0.1 -0.2 N.D.
temperature LB 23C -0.3 +0.4 +0.0 +0.1 N.D.
stress Cobalt chloride 0.32 mM -0.2 +0.4 -0.0 +0.1 N.D.
pH LB, pH5 -0.3 -0.1 +0.2 +0.4 N.D.
nitrogen source Ammonium chloride (N) +0.4 -0.4 +0.0 +0.2 N.D.
lb LB -0.4 +0.6 +0.0 +0.0 N.D.
stress Polymyxin B sulfate 0.0001 mg/ml -0.0 +0.5 -0.0 -0.2 N.D.
stress copper (II) chloride 1 mM +0.5 -0.2 +0.1 +0.0 N.D.
motility inner cut, R2A soft agar motility assay +0.4 -0.2 +0.2 +0.1 N.D.
stress nitrate 100 mM -0.2 +0.4 +0.1 +0.1 N.D.
pH LB, pH5 -0.1 -0.2 +0.3 +0.5 N.D.
nitrogen source L-Alanine (N) -0.1 +0.6 +0.0 +0.0 N.D.
carbon source succinate (C) +0.3 +0.4 -0.0 -0.1 N.D.
carbon source a-Ketoglutaric (C) -0.2 +0.8 -0.1 +0.1 N.D.
stress Chlorite 0.1 mM +0.6 +0.1 -0.0 +0.0 N.D.
stress Cobalt chloride 0.4 mM +0.1 +0.5 +0.1 +0.0 N.D.
carbon source L-Arabinose (C) +0.3 +0.4 +0.2 +0.1 N.D.
stress Bacitracin 0.032 mg/ml -0.0 +0.7 +0.2 +0.2 N.D.
stress nitrite 10 mM +0.6 +0.4 -0.0 +0.0 N.D.
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