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Gene
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Cofit
Protein
Homologs
Fitness for 5 genes in
Acidovorax sp. GW101-3H11
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Ac3H11_4662 and Ac3H11_4663 overlap by 4 nucleotides
Ac3H11_4663 and Ac3H11_4664 are separated by 58 nucleotides
Ac3H11_4664 and Ac3H11_4665 are separated by 37 nucleotides
Ac3H11_4665 and Ac3H11_4666 are separated by 250 nucleotides
Ac3H11_4662 - hypothetical protein, at 269,265 to 269,780
_4662
Ac3H11_4663 - ABC-type multidrug transport system, permease component, at 269,777 to 270,703
_4663
Ac3H11_4664 - Cyanate hydratase (EC 4.2.1.104), at 270,762 to 271,205
_4664
Ac3H11_4665 - FIG00953527: hypothetical protein, at 271,243 to 271,815
_4665
Ac3H11_4666 - Phosphoribosylglycinamide formyltransferase 2 (EC 2.1.2.-), at 272,066 to 273,268
_4666
Group
Condition
Ac3H11
_4662
Ac3H11
_4663
Ac3H11
_4664
Ac3H11
_4665
Ac3H11
_4666
pH
LB, pH10
-0.1
-0.4
-0.5
-0.1
+0.2
phage
phage 93.1
+0.0
-0.1
-0.7
+0.1
-0.1
carbon source
pyruvate (C)
+0.1
+0.1
-0.4
-0.2
-0.2
stress
D-Cycloserine 0.05 mg/ml
+0.3
-0.3
-0.4
-0.1
+0.0
stress
Chlorate 20 mM
+0.2
-0.2
-0.4
+0.0
-0.1
lb
LB
+0.4
-0.1
-0.3
-0.2
-0.1
stress
sodium fluoride 20 mM
-0.2
+0.1
-0.4
+0.3
+0.1
stress
copper (II) chloride 1 mM
-0.4
-0.2
+0.4
-0.1
+0.1
nitrogen source
L-Alanine (N)
-0.5
-0.0
-0.0
-0.1
+0.4
phage
phage 93.1
+0.1
-0.0
-0.5
-0.2
+0.5
stress
Cobalt chloride 0.32 mM
-0.4
+0.1
+0.1
-0.0
+0.3
stress
Cisplatin 0.005 mg/ml
+0.2
+0.4
-0.8
+0.3
-0.0
carbon source
a-Ketoglutaric (C)
+0.3
-0.2
+0.4
-0.3
-0.0
stress
Bacitracin 0.032 mg/ml
+0.1
+0.1
-0.5
+0.3
+0.3
stress
perchlorate 25 mM
-0.0
-0.3
+0.5
+0.1
+0.1
lb
LB
+0.1
-0.1
+0.6
+0.1
-0.2
stress
nitrite 10 mM
-0.0
-0.2
+0.5
+0.2
+0.1
carbon source
D,L-Lactate (C)
-0.2
+0.1
+0.3
+0.2
+0.1
nitrogen source
D-Alanine (N)
-0.1
+0.1
+0.3
+0.4
-0.1
motility
inner cut, R2A soft agar motility assay
+0.1
-0.4
+0.7
-0.1
+0.3
carbon source
D-Ribose (C)
+0.4
+0.2
+0.3
+0.1
-0.1
carbon source
pyruvate (C)
+0.4
+0.1
+0.3
+0.1
-0.0
stress
sodium fluoride 25 mM
+0.4
+0.2
+0.2
-0.1
+0.2
stress
A22 0.025 mg/ml
+0.1
+0.1
+0.4
+0.3
+0.1
stress
Fusidic 0.001 mg/ml
+0.0
+0.1
+0.5
+0.2
+0.1
motility
inner cut, R2A soft agar motility assay
-0.1
+0.1
+0.7
+0.4
-0.0
stress
copper (II) chloride 1 mM
+0.4
+0.3
+0.1
+0.4
-0.0
stress
perchlorate 10 mM
-0.2
+0.3
+0.8
+0.3
+0.0
stress
Chlorite 0.1 mM
+0.3
+0.0
+0.7
+0.2
+0.1
stress
copper (II) chloride 2 mM
+0.3
+0.1
+0.6
+0.5
+0.1
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Ac3H11_4664
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