Fitness for 5 genes in Acidovorax sp. GW101-3H11

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500 ntAc3H11_4482 and Ac3H11_4483 are separated by 183 nucleotidesAc3H11_4483 and Ac3H11_4484 are separated by 145 nucleotidesAc3H11_4484 and Ac3H11_4485 are separated by 20 nucleotidesAc3H11_4485 and Ac3H11_4486 are separated by 112 nucleotides Ac3H11_4482 - Adenine-specific DNA methyltransferase, at 68,202 to 68,855 _4482 Ac3H11_4483 - Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD, at 69,039 to 70,553 _4483 Ac3H11_4484 - Glycine cleavage system transcriptional activator GcvA, at 70,699 to 71,604 _4484 Ac3H11_4485 - Formyltetrahydrofolate deformylase (EC 3.5.1.10), at 71,625 to 72,476 _4485 Ac3H11_4486 - diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s), at 72,589 to 74,889 _4486
Group Condition Ac3H11_4482 Ac3H11_4483 Ac3H11_4484 Ac3H11_4485 Ac3H11_4486
carbon source D-Lactate (C) N.D. -6.1 -3.8 N.D. -0.1
carbon source D-Lactate (C) N.D. -5.3 -3.7 N.D. -0.1
carbon source D,L-Lactate (C) N.D. -4.4 -4.3 N.D. -0.2
carbon source D,L-Lactate (C) N.D. -4.6 -3.3 N.D. -0.1
carbon source D-Lactate (C) N.D. -4.2 -3.4 N.D. +0.0
carbon source D,L-Lactate (C) N.D. -3.0 -2.8 N.D. -0.2
carbon source L-Lactate (C) N.D. -1.3 -4.2 N.D. -0.1
carbon source L-Lactate (C) N.D. -0.6 -3.4 N.D. -0.1
carbon source L-Lactate (C) N.D. -1.0 -3.2 N.D. +0.2
carbon source pyruvate (C) N.D. -0.7 -0.9 N.D. +0.0
carbon source L-Arabinose (C) N.D. -1.0 -0.5 N.D. +0.1
carbon source L-Arabinose (C) N.D. -1.0 -0.4 N.D. -0.0
carbon source pyruvate (C) N.D. -0.8 -0.5 N.D. +0.1
carbon source Tween 20 (C) N.D. -0.9 -0.1 N.D. -0.1
carbon source L-Arabinose (C) N.D. -0.9 -0.2 N.D. +0.0
stress Cisplatin 0.005 mg/ml N.D. -0.0 -0.6 N.D. -0.5
nitrogen source Uridine (N) N.D. -0.7 +0.1 N.D. -0.0
phage phage 93.2 N.D. -0.2 -0.2 N.D. -0.2
carbon source pyruvate (C) N.D. -0.4 -0.3 N.D. +0.1
stress D-Cycloserine 0.05 mg/ml N.D. -0.1 -0.5 N.D. -0.0
carbon source D-Mannose (C) N.D. -0.2 -0.4 N.D. -0.0
stress Sisomicin 0.004 mg/ml N.D. -0.3 -0.2 N.D. +0.2
carbon source D-Ribose (C) N.D. -0.3 -0.2 N.D. +0.2
stress Bacitracin 0.032 mg/ml N.D. +0.3 -0.3 N.D. -0.1
pH LB, pH10 N.D. +0.4 -0.1 N.D. -0.2
nitrogen source L-Alanine (N) N.D. -0.1 +0.4 N.D. -0.1
nitrogen source D-Alanine (N) N.D. -0.5 +0.4 N.D. +0.3
carbon source D-Gluconic Acid (C) N.D. +0.3 -0.3 N.D. +0.2
nitrogen source Ammonium chloride (N) N.D. -0.8 +0.8 N.D. +0.3
carbon source a-Ketoglutaric (C) N.D. +0.1 +0.4 N.D. +0.3
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