Fitness for 5 genes in Acidovorax sp. GW101-3H11

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500 ntAc3H11_4444 and Ac3H11_4445 overlap by 8 nucleotidesAc3H11_4445 and Ac3H11_4446 are separated by 212 nucleotidesAc3H11_4446 and Ac3H11_4447 are separated by 161 nucleotidesAc3H11_4447 and Ac3H11_4448 overlap by 17 nucleotides Ac3H11_4444 - Hydrolase, alpha/beta fold family functionally coupled to Phosphoribulokinase, at 19,166 to 20,188 _4444 Ac3H11_4445 - FIG00931152: hypothetical protein, at 20,181 to 20,732 _4445 Ac3H11_4446 - Cytochrome c5, at 20,945 to 21,493 _4446 Ac3H11_4447 - RND efflux system, outer membrane lipoprotein CmeC, at 21,655 to 23,079 _4447 Ac3H11_4448 - RND efflux system, inner membrane transporter CmeB, at 23,063 to 26,218 _4448
Group Condition Ac3H11_4444 Ac3H11_4445 Ac3H11_4446 Ac3H11_4447 Ac3H11_4448
stress Tetracycline 0.0001 mg/ml -0.0 -0.1 -0.1 -3.1 -2.4
stress Chloramphenicol 0.001 mg/ml -0.0 -0.0 -0.2 -3.1 -2.3
stress Tetracycline 0.00005 mg/ml -0.0 -0.1 -0.2 -2.6 -2.5
stress Fusidic 0.001 mg/ml +0.2 +0.1 -0.1 -3.0 -2.2
stress Bacitracin 0.032 mg/ml +0.2 -0.0 -0.1 -2.2 -2.6
stress Chloramphenicol 0.0005 mg/ml +0.1 -0.1 -0.0 -2.1 -2.0
nitrogen source Ammonium chloride (N) +0.4 +0.2 -0.6 -2.4 -1.5
stress copper (II) chloride 1 mM +0.3 +0.2 -0.2 -2.3 -1.7
stress Aluminum chloride 4 mM +0.1 +0.1 -0.3 -1.9 -1.5
stress Zinc 1 mM -0.0 +0.1 +0.2 -1.9 -1.5
carbon source Tween 20 (C) -0.0 -0.1 -0.2 -0.7 -1.6
stress Dimethyl Sulfoxide 6 vol% -0.0 +0.1 +0.1 -1.1 -1.7
lb LB +0.0 -0.2 -0.4 -0.6 -1.3
stress sodium fluoride 50 mM -0.2 -0.0 +0.0 -1.0 -1.3
carbon source D-Gluconic Acid (C) +0.0 +0.0 -1.5 +0.1 -1.0
stress Aluminum chloride 2 mM +0.2 +0.0 -0.1 -1.0 -1.4
carbon source pyruvate (C) +0.2 -0.2 -1.5 -0.1 -0.7
stress Doxycycline hyclate 0.000025 mg/ml +0.1 -0.2 +0.0 -1.3 -0.9
stress copper (II) chloride 2 mM +0.2 +0.3 -0.3 -1.6 -0.7
stress Bacitracin 0.008 mg/ml +0.2 +0.1 -0.3 -0.6 -1.5
pH LB, pH10 -0.2 -0.1 +0.5 -1.4 -0.7
stress Sisomicin 0.004 mg/ml -0.1 -0.1 +0.2 -0.7 -1.2
stress Bacitracin 0.016 mg/ml +0.0 -0.2 +0.3 -0.4 -1.5
carbon source D-Gluconic Acid (C) +0.1 +0.0 -1.7 +0.1 -0.3
motility inner cut, R2A soft agar motility assay +0.3 -0.3 -0.6 -0.1 -0.9
stress perchlorate 25 mM +0.2 +0.0 +0.3 -1.1 -0.8
stress nitrate 100 mM +0.0 +0.2 +0.4 -1.0 -1.1
carbon source a-Ketoglutaric (C) -0.1 -0.3 -0.8 +0.8 +0.2
stress syringaldehyde 2.5 mM +0.1 -0.2 -0.1 +0.7 +1.3
nitrogen source L-tyrosine (N) -0.0 +0.0 +0.3 +0.8 +1.1
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