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Protein
Homologs
Fitness for 5 genes in
Acidovorax sp. GW101-3H11
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500 nt
Ac3H11_440 and Ac3H11_441 are separated by 102 nucleotides
Ac3H11_441 and Ac3H11_442 are separated by 173 nucleotides
Ac3H11_442 and Ac3H11_443 are separated by 146 nucleotides
Ac3H11_443 and Ac3H11_444 are separated by 118 nucleotides
Ac3H11_440 - FIG004454: RNA binding protein, at 126,957 to 127,361
_440
Ac3H11_441 - Heat shock protein FtsJ/RrmJ @ Ribosomal RNA large subunit methyltransferase E (EC 2.1.1.-), at 127,464 to 128,126
_441
Ac3H11_442 - Cell division protein FtsH (EC 3.4.24.-), at 128,300 to 130,219
_442
Ac3H11_443 - Dihydropteroate synthase (EC 2.5.1.15), at 130,366 to 131,196
_443
Ac3H11_444 - Phosphoglucosamine mutase (EC 5.4.2.10), at 131,315 to 132,649
_444
Group
Condition
Ac3H11
_440
Ac3H11
_441
Ac3H11
_442
Ac3H11
_443
Ac3H11
_444
stress
Chlorite 0.1 mM
N.D.
-0.7
N.D.
N.D.
N.D.
stress
Paraquat dichloride 0.01 mg/ml
N.D.
-0.7
N.D.
N.D.
N.D.
stress
Bacitracin 0.008 mg/ml
N.D.
-0.6
N.D.
N.D.
N.D.
stress
Phosphomycin 0.06 mg/ml
N.D.
-0.6
N.D.
N.D.
N.D.
motility
inner cut, R2A soft agar motility assay
N.D.
-0.6
N.D.
N.D.
N.D.
nitrogen source
L-tyrosine (N)
N.D.
-0.5
N.D.
N.D.
N.D.
stress
D-Cycloserine 0.05 mg/ml
N.D.
-0.5
N.D.
N.D.
N.D.
phage
phage 93.2
N.D.
-0.5
N.D.
N.D.
N.D.
stress
copper (II) chloride 2 mM
N.D.
-0.4
N.D.
N.D.
N.D.
stress
Bacitracin 0.016 mg/ml
N.D.
-0.4
N.D.
N.D.
N.D.
lb
LB
N.D.
-0.4
N.D.
N.D.
N.D.
stress
Zinc 1 mM
N.D.
-0.4
N.D.
N.D.
N.D.
phage
phage 93.1
N.D.
-0.4
N.D.
N.D.
N.D.
stress
Chlorate 20 mM
N.D.
-0.4
N.D.
N.D.
N.D.
carbon source
L-Glutamine (C)
N.D.
-0.4
N.D.
N.D.
N.D.
motility
inner cut, R2A soft agar motility assay
N.D.
-0.4
N.D.
N.D.
N.D.
carbon source
D-Gluconic Acid (C)
N.D.
-0.4
N.D.
N.D.
N.D.
stress
nitrite 10 mM
N.D.
-0.3
N.D.
N.D.
N.D.
nitrogen source
D-Alanine (N)
N.D.
-0.3
N.D.
N.D.
N.D.
nitrogen source
L-Isoleucine (N)
N.D.
+0.3
N.D.
N.D.
N.D.
stress
Cobalt chloride 0.32 mM
N.D.
+0.4
N.D.
N.D.
N.D.
carbon source
succinate (C)
N.D.
+0.4
N.D.
N.D.
N.D.
stress
Doxycycline hyclate 0.000025 mg/ml
N.D.
+0.4
N.D.
N.D.
N.D.
carbon source
D-Ribose (C)
N.D.
+0.4
N.D.
N.D.
N.D.
stress
Nickel (II) chloride 0.6 mM
N.D.
+0.4
N.D.
N.D.
N.D.
nitrogen source
L-Threonine (N)
N.D.
+0.5
N.D.
N.D.
N.D.
stress
Tetracycline 0.0001 mg/ml
N.D.
+0.7
N.D.
N.D.
N.D.
carbon source
L-Malic (C)
N.D.
+0.7
N.D.
N.D.
N.D.
stress
Chloramphenicol 0.0005 mg/ml
N.D.
+0.7
N.D.
N.D.
N.D.
stress
Chloramphenicol 0.001 mg/ml
N.D.
+1.6
N.D.
N.D.
N.D.
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