Fitness for 5 genes in Acidovorax sp. GW101-3H11

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500 ntAc3H11_4408 and Ac3H11_4409 are separated by 35 nucleotidesAc3H11_4409 and Ac3H11_4410 are separated by 244 nucleotidesAc3H11_4410 and Ac3H11_4411 are separated by 84 nucleotidesAc3H11_4411 and Ac3H11_4412 are separated by 64 nucleotides Ac3H11_4408 - putative lipoprotein transmembrane, at 203,786 to 204,265 _4408 Ac3H11_4409 - Peptide deformylase (EC 3.5.1.88), at 204,301 to 204,744 _4409 Ac3H11_4410 - Uncharacterized protein with LysM domain, COG1652, at 204,989 to 206,221 _4410 Ac3H11_4411 - Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake, at 206,306 to 207,484 _4411 Ac3H11_4412 - Thymidine phosphorylase (EC 2.4.2.4), at 207,549 to 209,903 _4412
Group Condition Ac3H11_4408 Ac3H11_4409 Ac3H11_4410 Ac3H11_4411 Ac3H11_4412
pH LB, pH10 -1.6 N.D. +0.2 -0.0 +0.2
nitrogen source L-Leucine (N) -0.0 N.D. -0.5 -0.2 -0.1
stress 5-Hydroxymethylfurfural 5 mM -0.6 N.D. -0.1 -0.1 +0.1
nitrogen source Uridine (N) -0.2 N.D. -0.5 +0.0 +0.1
nitrogen source Ammonium chloride (N) -0.3 N.D. -0.1 -0.3 +0.2
stress Bacitracin 0.008 mg/ml -0.5 N.D. +0.1 -0.2 +0.1
carbon source Tween 20 (C) +0.2 N.D. -0.5 +0.0 +0.1
stress nitrite 10 mM -0.3 N.D. +0.1 +0.2 -0.1
nitrogen source D-Alanine (N) -0.1 N.D. -0.2 +0.6 -0.2
stress Phosphomycin 0.06 mg/ml -0.4 N.D. +0.2 +0.1 +0.2
pH LB, pH10 +0.4 N.D. +0.1 -0.2 +0.1
carbon source D-Gluconic Acid (C) +0.4 N.D. +0.2 -0.1 -0.0
stress Zinc 1 mM +0.3 N.D. +0.1 -0.1 +0.2
carbon source D-Glucose (C) +0.4 N.D. -0.1 +0.1 +0.2
carbon source D-Ribose (C) +0.3 N.D. -0.0 +0.2 +0.2
stress Nickel (II) chloride 0.6 mM -0.1 N.D. +0.3 +0.0 +0.5
lb LB +0.4 N.D. +0.2 -0.1 +0.2
stress Sisomicin 0.0005 mg/ml +0.0 N.D. +0.5 -0.1 +0.3
stress perchlorate 25 mM +0.0 N.D. +0.3 +0.3 +0.1
stress Chlorite 0.1 mM +0.4 N.D. +0.1 +0.2 +0.0
stress Paraquat dichloride 0.01 mg/ml +0.2 N.D. +0.2 +0.2 +0.2
lb LB +0.0 N.D. +0.5 -0.0 +0.3
temperature LB 30C +0.4 N.D. +0.2 +0.2 +0.2
motility inner cut, R2A soft agar motility assay +0.5 N.D. +0.0 +0.1 +0.2
stress Cobalt chloride 0.16 mM +0.2 N.D. +0.3 +0.2 +0.3
stress Sisomicin 0.001 mg/ml +0.3 N.D. +0.2 +0.4 +0.2
stress Cisplatin 0.0025 mg/ml +0.6 N.D. +0.1 +0.3 +0.1
lb LB +0.3 N.D. +0.5 +0.1 +0.3
stress Bacitracin 0.016 mg/ml +0.7 N.D. +0.3 +0.2 +0.2
motility inner cut, R2A soft agar motility assay +0.7 N.D. +0.1 +0.5 +0.2
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