Fitness for 5 genes in Acidovorax sp. GW101-3H11

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500 ntAc3H11_4404 and Ac3H11_4405 are separated by 178 nucleotidesAc3H11_4405 and Ac3H11_4406 overlap by 4 nucleotidesAc3H11_4406 and Ac3H11_4407 overlap by 4 nucleotidesAc3H11_4407 and Ac3H11_4408 are separated by 47 nucleotides Ac3H11_4404 - Phosphoglycerate kinase (EC 2.7.2.3), at 200,230 to 201,429 _4404 Ac3H11_4405 - Probable transmembrane protein, at 201,608 to 201,946 _4405 Ac3H11_4406 - Branched-chain amino acid transport protein AzlC, at 201,943 to 202,767 _4406 Ac3H11_4407 - Methionyl-tRNA formyltransferase (EC 2.1.2.9), at 202,764 to 203,738 _4407 Ac3H11_4408 - putative lipoprotein transmembrane, at 203,786 to 204,265 _4408
Group Condition Ac3H11_4404 Ac3H11_4405 Ac3H11_4406 Ac3H11_4407 Ac3H11_4408
nitrogen source Ammonium chloride (N) N.D. -1.1 -0.4 N.D. -0.3
nitrogen source Uridine (N) N.D. -0.6 -0.6 N.D. -0.2
nitrogen source L-Histidine (N) N.D. -0.4 -0.6 N.D. -0.1
nitrogen source L-Alanine (N) N.D. -0.9 -0.1 N.D. +0.0
carbon source D-Galactose (C) N.D. -0.6 -0.6 N.D. +0.2
pH LB, pH10 N.D. +0.3 +0.2 N.D. -1.6
nitrogen source L-tyrosine (N) N.D. -0.6 -0.4 N.D. +0.1
stress nitrite 10 mM N.D. -0.2 -0.3 N.D. -0.3
carbon source D-Galactose (C) N.D. -0.4 -0.2 N.D. -0.3
stress Phosphomycin 0.02 mg/ml N.D. -0.4 -0.2 N.D. -0.3
nitrogen source L-Arginine (N) N.D. -0.5 -0.5 N.D. +0.0
stress 5-Hydroxymethylfurfural 5 mM N.D. -0.2 +0.1 N.D. -0.6
nitrogen source L-Proline (N) N.D. -0.4 -0.3 N.D. +0.2
carbon source D-Galactose (C) N.D. -0.5 -0.2 N.D. +0.2
lb LB N.D. -0.3 -0.4 N.D. +0.4
stress Cisplatin 0.005 mg/ml N.D. -0.2 -0.3 N.D. +0.3
pH LB, pH7 N.D. -0.3 -0.2 N.D. +0.3
stress Fusidic 0.001 mg/ml N.D. -0.2 -0.3 N.D. +0.4
stress Chlorite 0.1 mM N.D. -0.4 -0.1 N.D. +0.4
stress Cisplatin 0.0025 mg/ml N.D. -0.6 -0.1 N.D. +0.6
carbon source a-Ketoglutaric (C) N.D. -0.1 +0.4 N.D. -0.3
carbon source D-Glucose (C) N.D. -0.2 -0.2 N.D. +0.4
stress Bacitracin 0.016 mg/ml N.D. -0.4 -0.3 N.D. +0.7
carbon source D-Gluconic Acid (C) N.D. -0.1 -0.3 N.D. +0.4
stress copper (II) chloride 2 mM N.D. +0.4 +0.4 N.D. +0.2
motility inner cut, R2A soft agar motility assay N.D. +0.4 +0.1 N.D. +0.7
phage phage 93.2 N.D. +0.4 +0.8 N.D. +0.2
phage phage 93.1 N.D. +0.7 +0.8 N.D. -0.0
phage phage 93.1 N.D. +0.9 +0.8 N.D. -0.1
stress D-Cycloserine 0.05 mg/ml N.D. +2.6 +3.0 N.D. +0.1
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