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Cofit
Protein
Homologs
Fitness for 5 genes in
Acidovorax sp. GW101-3H11
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Ac3H11_4377 and Ac3H11_4378 are separated by 88 nucleotides
Ac3H11_4378 and Ac3H11_4379 are separated by 124 nucleotides
Ac3H11_4379 and Ac3H11_4380 are separated by 465 nucleotides
Ac3H11_4380 and Ac3H11_4381 are separated by 96 nucleotides
Ac3H11_4377 - Cyclic di-GMP binding protein precursor, at 166,448 to 168,823
_4377
Ac3H11_4378 - Cellulose synthase operon protein C, at 168,912 to 173,249
_4378
Ac3H11_4379 - hypothetical protein, at 173,374 to 174,936
_4379
Ac3H11_4380 - Putative membrane protein, at 175,402 to 176,115
_4380
Ac3H11_4381 - hypothetical protein, at 176,212 to 176,787
_4381
Group
Condition
Ac3H11
_4377
Ac3H11
_4378
Ac3H11
_4379
Ac3H11
_4380
Ac3H11
_4381
nitrogen source
Ammonium chloride (N)
+1.0
+0.8
+0.8
-0.4
+0.1
nitrogen source
D-Alanine (N)
+1.6
+1.1
+0.2
+0.0
-0.3
lb
LB
+1.6
+1.8
+0.1
-0.3
-0.5
stress
Cisplatin 0.005 mg/ml
+1.2
+1.3
-0.0
+0.4
+0.0
stress
Zinc 1 mM
+1.5
+1.6
+0.2
+0.1
+0.0
lb
LB
+1.8
+1.9
+0.2
-0.3
+0.1
stress
A22 0.025 mg/ml
+1.7
+1.7
+0.5
-0.2
-0.1
stress
Nickel (II) chloride 0.6 mM
+1.6
+1.7
+0.4
-0.1
+0.1
stress
Fusidic 0.001 mg/ml
+1.6
+1.7
+0.2
+0.1
+0.2
stress
Cobalt chloride 0.32 mM
+2.0
+2.1
+0.2
-0.1
-0.1
stress
Bacitracin 0.032 mg/ml
+2.1
+2.1
+0.1
-0.2
-0.1
stress
Bacitracin 0.016 mg/ml
+2.0
+2.1
+0.1
-0.0
+0.0
stress
Sisomicin 0.001 mg/ml
+2.0
+2.1
+0.4
-0.0
+0.2
stress
Bacitracin 0.008 mg/ml
+2.2
+2.3
+0.1
-0.0
+0.1
stress
Phosphomycin 0.02 mg/ml
+2.2
+2.2
+0.3
-0.1
-0.1
stress
Cisplatin 0.0025 mg/ml
+2.3
+2.3
+0.3
-0.1
+0.1
stress
Chlorate 20 mM
+2.2
+2.2
+0.5
+0.0
-0.0
stress
copper (II) chloride 1 mM
+2.6
+2.4
+0.4
-0.2
-0.3
stress
Paraquat dichloride 0.01 mg/ml
+2.6
+2.8
+0.3
+0.2
-0.6
stress
Phosphomycin 0.06 mg/ml
+2.5
+2.6
+0.6
+0.1
-0.1
stress
copper (II) chloride 1 mM
+2.7
+2.8
+0.4
-0.1
-0.0
stress
Chlorite 0.1 mM
+2.7
+2.6
+0.4
+0.2
+0.1
lb
LB
+2.6
+2.7
+0.4
+0.2
+0.1
stress
Cobalt chloride 0.32 mM
+2.8
+2.9
+0.5
-0.0
+0.1
stress
Sisomicin 0.0005 mg/ml
+3.0
+3.1
+0.8
-0.1
-0.1
stress
Polymyxin B sulfate 0.0001 mg/ml
+3.2
+3.3
+0.6
+0.0
-0.1
stress
Nickel (II) chloride 0.6 mM
+3.5
+3.5
+0.5
-0.1
-0.1
lb
LB
+3.7
+3.7
+0.8
-0.2
-0.0
stress
Cobalt chloride 0.16 mM
+3.6
+3.8
+0.7
-0.0
-0.1
lb
LB
+3.8
+3.8
+0.9
-0.1
-0.1
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