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Cofit
Protein
Homologs
Fitness for 5 genes in
Acidovorax sp. GW101-3H11
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Ac3H11_4374 and Ac3H11_4375 overlap by 4 nucleotides
Ac3H11_4375 and Ac3H11_4376 overlap by 4 nucleotides
Ac3H11_4376 and Ac3H11_4377 are separated by 3 nucleotides
Ac3H11_4377 and Ac3H11_4378 are separated by 88 nucleotides
Ac3H11_4374 - hypothetical protein, at 163,237 to 163,473
_4374
Ac3H11_4375 - Cellulose synthase, putative, at 163,470 to 164,252
_4375
Ac3H11_4376 - Cellulose synthase catalytic subunit [UDP-forming] (EC 2.4.1.12), at 164,249 to 166,444
_4376
Ac3H11_4377 - Cyclic di-GMP binding protein precursor, at 166,448 to 168,823
_4377
Ac3H11_4378 - Cellulose synthase operon protein C, at 168,912 to 173,249
_4378
Group
Condition
Ac3H11
_4374
Ac3H11
_4375
Ac3H11
_4376
Ac3H11
_4377
Ac3H11
_4378
stress
Cisplatin 0.005 mg/ml
N.D.
+1.0
+1.4
+1.2
+1.3
nitrogen source
D-Alanine (N)
N.D.
+1.0
+1.4
+1.6
+1.1
stress
nitrite 10 mM
N.D.
+1.3
+1.4
+1.3
+1.5
stress
Zinc 1 mM
N.D.
+1.6
+1.5
+1.5
+1.6
stress
Fusidic 0.001 mg/ml
N.D.
+1.6
+1.5
+1.6
+1.7
stress
A22 0.025 mg/ml
N.D.
+1.5
+1.6
+1.7
+1.7
stress
Nickel (II) chloride 0.6 mM
N.D.
+1.7
+1.7
+1.6
+1.7
lb
LB
N.D.
+1.7
+1.8
+1.6
+1.8
lb
LB
N.D.
+1.8
+1.8
+1.8
+1.9
stress
Bacitracin 0.016 mg/ml
N.D.
+1.9
+2.0
+2.0
+2.1
stress
Cobalt chloride 0.32 mM
N.D.
+2.0
+2.0
+2.0
+2.1
stress
Sisomicin 0.001 mg/ml
N.D.
+2.0
+2.1
+2.0
+2.1
stress
Bacitracin 0.032 mg/ml
N.D.
+1.9
+2.0
+2.1
+2.1
stress
Phosphomycin 0.02 mg/ml
N.D.
+2.1
+2.2
+2.2
+2.2
stress
Chlorate 20 mM
N.D.
+2.1
+2.2
+2.2
+2.2
stress
Bacitracin 0.008 mg/ml
N.D.
+2.2
+2.2
+2.2
+2.3
stress
Cisplatin 0.0025 mg/ml
N.D.
+2.1
+2.4
+2.3
+2.3
stress
copper (II) chloride 1 mM
N.D.
+2.3
+2.5
+2.6
+2.4
stress
Phosphomycin 0.06 mg/ml
N.D.
+2.5
+2.6
+2.5
+2.6
stress
Chlorite 0.1 mM
N.D.
+2.5
+2.6
+2.7
+2.6
lb
LB
N.D.
+2.8
+2.7
+2.6
+2.7
stress
Paraquat dichloride 0.01 mg/ml
N.D.
+2.6
+2.8
+2.6
+2.8
stress
copper (II) chloride 1 mM
N.D.
+2.6
+2.8
+2.7
+2.8
stress
Cobalt chloride 0.32 mM
N.D.
+2.8
+2.8
+2.8
+2.9
stress
Sisomicin 0.0005 mg/ml
N.D.
+3.0
+3.0
+3.0
+3.1
stress
Polymyxin B sulfate 0.0001 mg/ml
N.D.
+3.3
+3.3
+3.2
+3.3
stress
Nickel (II) chloride 0.6 mM
N.D.
+3.5
+3.5
+3.5
+3.5
lb
LB
N.D.
+3.7
+3.7
+3.7
+3.7
stress
Cobalt chloride 0.16 mM
N.D.
+3.6
+3.7
+3.6
+3.8
lb
LB
N.D.
+3.7
+3.8
+3.8
+3.8
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