Fitness for 5 genes in Acidovorax sp. GW101-3H11

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500 ntAc3H11_4366 and Ac3H11_4367 are separated by 120 nucleotidesAc3H11_4367 and Ac3H11_4368 are separated by 75 nucleotidesAc3H11_4368 and Ac3H11_4369 are separated by 52 nucleotidesAc3H11_4369 and Ac3H11_4370 are separated by 87 nucleotides Ac3H11_4366 - TcuA: flavoprotein used to oxidize tricarballylate to cis-aconitate, at 153,861 to 155,354 _4366 Ac3H11_4367 - TcuR: regulates tcuABC genes used in utilization of tricarballylate, at 155,475 to 156,422 _4367 Ac3H11_4368 - Outer membrane protein (porin), at 156,498 to 157,562 _4368 Ac3H11_4369 - putative exported protein, at 157,615 to 158,613 _4369 Ac3H11_4370 - FIG00786362: hypothetical protein, at 158,701 to 159,891 _4370
Group Condition Ac3H11_4366 Ac3H11_4367 Ac3H11_4368 Ac3H11_4369 Ac3H11_4370
stress perchlorate 10 mM -0.5 N.D. -0.1 -0.4 +0.3
stress Chlorite 0.1 mM +0.1 N.D. -0.4 -0.4 +0.0
stress Phosphomycin 0.06 mg/ml -0.1 N.D. -0.1 +0.3 -0.7
stress copper (II) chloride 2 mM -0.3 N.D. -0.4 +0.4 -0.3
motility inner cut, R2A soft agar motility assay +0.4 N.D. -0.6 -0.2 -0.1
stress copper (II) chloride 1 mM -0.2 N.D. -0.8 +0.2 +0.4
stress Phosphomycin 0.02 mg/ml -0.2 N.D. -0.5 +0.1 +0.2
stress Cisplatin 0.005 mg/ml -0.5 N.D. +0.6 +0.3 -0.5
nitrogen source D-Alanine (N) -0.1 N.D. -0.0 -0.5 +0.6
stress Paraquat dichloride 0.01 mg/ml +0.1 N.D. -0.4 -0.1 +0.4
motility inner cut, R2A soft agar motility assay -0.1 N.D. +0.4 -0.5 +0.2
stress Aluminum chloride 4 mM -0.1 N.D. +0.1 -0.3 +0.4
motility inner cut, R2A soft agar motility assay +0.0 N.D. -0.5 +0.3 +0.4
stress Nickel (II) chloride 0.8 mM -0.4 N.D. +0.1 -0.1 +0.8
nitrogen source Ammonium chloride (N) -0.2 N.D. +0.6 -0.5 +0.6
carbon source D-Ribose (C) +0.3 N.D. +0.2 -0.2 +0.3
stress nitrate 100 mM +0.0 N.D. +0.2 -0.2 +0.5
phage phage 93.2 -0.0 N.D. -0.3 -0.1 +1.1
stress perchlorate 25 mM +0.1 N.D. -0.2 +0.0 +0.7
nitrogen source L-Threonine (N) -0.3 N.D. -0.4 +0.2 +1.2
carbon source pyruvate (C) +0.3 N.D. +0.3 +0.0 +0.3
nitrogen source L-tyrosine (N) +0.0 N.D. +0.0 +0.4 +0.5
carbon source D,L-Lactate (C) +0.2 N.D. +0.7 +0.0 -0.0
carbon source L-Arabinose (C) +0.2 N.D. +0.2 -0.0 +0.6
lb LB +0.2 N.D. +0.2 +0.1 +0.5
stress D-Cycloserine 0.05 mg/ml +0.0 N.D. +0.7 +0.7 -0.3
carbon source D-Lactate (C) +0.1 N.D. +0.1 +0.2 +0.8
carbon source D-Galactose (C) +0.1 N.D. +0.4 +0.3 +0.5
carbon source D-Gluconic Acid (C) +0.2 N.D. +0.3 -0.1 +1.0
pH LB, pH10 +0.2 N.D. +0.5 -0.1 +0.9
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