Fitness for 5 genes in Acidovorax sp. GW101-3H11

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500 ntAc3H11_4351 and Ac3H11_4352 overlap by 4 nucleotidesAc3H11_4352 and Ac3H11_4353 are separated by 21 nucleotidesAc3H11_4353 and Ac3H11_4354 are separated by 15 nucleotidesAc3H11_4354 and Ac3H11_4355 overlap by 4 nucleotides Ac3H11_4351 - sensor histidine kinase/response regulator, at 135,603 to 139,412 _4351 Ac3H11_4352 - Response regulator, at 139,409 to 140,401 _4352 Ac3H11_4353 - FIG00537393: hypothetical protein, at 140,423 to 142,138 _4353 Ac3H11_4354 - Glutamate synthase [NADPH] large chain (EC 1.4.1.13), at 142,154 to 142,684 _4354 Ac3H11_4355 - Na+ driven multidrug efflux pump, at 142,681 to 144,060 _4355
Group Condition Ac3H11_4351 Ac3H11_4352 Ac3H11_4353 Ac3H11_4354 Ac3H11_4355
stress Cisplatin 0.0025 mg/ml +0.2 -1.1 -0.2 -0.1 +0.0
lb LB +0.1 -0.9 +0.2 +0.2 -0.5
lb LB +0.2 -0.9 +0.0 -0.0 -0.3
motility inner cut, R2A soft agar motility assay +0.1 -1.1 -0.0 -0.2 +0.4
carbon source D-Lactate (C) +0.1 -0.8 -0.2 +0.0 +0.1
stress Phosphomycin 0.06 mg/ml +0.2 -0.9 +0.1 +0.0 -0.0
lb LB +0.3 -0.8 +0.1 -0.0 +0.0
pH LB, pH10 +0.0 -0.6 -0.2 +0.1 +0.4
carbon source a-Ketoglutaric (C) +0.1 -0.7 -0.0 -0.1 +0.4
nitrogen source L-Isoleucine (N) +0.1 -0.6 +0.1 +0.1 +0.3
stress Sisomicin 0.001 mg/ml +0.1 -0.1 -0.0 +0.4 -0.6
carbon source a-Ketoglutaric (C) +0.1 +0.5 -0.1 +0.3 -0.8
lb LB +0.5 -0.3 +0.3 -0.3 -0.2
carbon source D-Ribose (C) +0.2 -0.6 +0.2 +0.3 -0.1
motility inner cut, R2A soft agar motility assay +0.1 -0.9 +0.3 +0.1 +0.4
nitrogen source L-Leucine (N) +0.2 -0.9 +0.2 +0.0 +0.4
stress Chlorite 0.1 mM +0.2 -0.6 +0.1 +0.3 +0.1
stress D-Cycloserine 0.05 mg/ml -0.1 -0.5 -0.1 +0.4 +0.4
stress copper (II) chloride 2 mM -0.0 -0.2 +0.0 -0.3 +0.6
nitrogen source L-Histidine (N) +0.4 -0.5 +0.2 +0.2 -0.0
nitrogen source L-Threonine (N) -0.0 -0.6 +0.4 +0.0 +0.5
phage phage 93.1 -0.3 -0.0 -0.1 +0.4 +0.5
pH LB, pH5 +0.3 +0.1 +0.3 +0.0 -0.3
stress copper (II) chloride 1 mM +0.4 -0.4 +0.2 +0.1 +0.4
stress Polymyxin B sulfate 0.0001 mg/ml +0.4 +0.1 +0.1 -0.1 +0.5
phage phage 93.2 +0.1 +0.5 -0.1 +0.1 +0.4
stress Zinc 1 mM +0.1 +0.6 +0.1 +0.1 +0.4
nitrogen source Ammonium chloride (N) +0.1 -0.3 +0.9 +0.2 +0.5
stress nitrite 10 mM +0.3 +1.0 -0.1 -0.2 +0.4
stress Cisplatin 0.005 mg/ml +0.2 +1.0 +0.2 -0.3 +0.5
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