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Protein
Homologs
Fitness for 5 genes in
Acidovorax sp. GW101-3H11
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Ac3H11_431 and Ac3H11_432 are separated by 43 nucleotides
Ac3H11_432 and Ac3H11_433 are separated by 21 nucleotides
Ac3H11_433 and Ac3H11_434 are separated by 99 nucleotides
Ac3H11_434 and Ac3H11_435 are separated by 281 nucleotides
Ac3H11_431 - Lipid-A-disaccharide synthase (EC 2.4.1.182), at 116,800 to 117,963
_431
Ac3H11_432 - Ribonuclease HII (EC 3.1.26.4), at 118,007 to 118,555
_432
Ac3H11_433 - 23S rRNA (guanosine-2'-O-) -methyltransferase rlmB (EC 2.1.1.-), at 118,577 to 119,350
_433
Ac3H11_434 - hypothetical protein, at 119,450 to 120,211
_434
Ac3H11_435 - Carbamoyl-phosphate synthase small chain (EC 6.3.5.5), at 120,493 to 121,710
_435
Group
Condition
Ac3H11
_431
Ac3H11
_432
Ac3H11
_433
Ac3H11
_434
Ac3H11
_435
motility
inner cut, R2A soft agar motility assay
N.D.
-1.3
-1.0
-0.0
N.D.
carbon source
D-Gluconic Acid (C)
N.D.
-1.0
-0.3
+0.1
N.D.
stress
Aluminum chloride 4 mM
N.D.
-0.9
-0.2
-0.0
N.D.
stress
Cobalt chloride 0.32 mM
N.D.
-1.0
+0.0
+0.0
N.D.
stress
Tetracycline 0.00005 mg/ml
N.D.
-0.9
+0.0
-0.1
N.D.
phage
phage 93.2
N.D.
-0.6
-0.3
+0.0
N.D.
lb
LB
N.D.
-0.1
-0.6
-0.1
N.D.
stress
Zinc 1 mM
N.D.
-0.1
-0.7
+0.1
N.D.
carbon source
L-Asparagine (C)
N.D.
-0.7
-0.3
+0.2
N.D.
stress
Cobalt chloride 0.4 mM
N.D.
-0.8
+0.2
+0.2
N.D.
stress
D-Cycloserine 0.05 mg/ml
N.D.
+0.3
-0.3
-0.2
N.D.
carbon source
propionate (C)
N.D.
-0.5
+0.3
+0.1
N.D.
stress
copper (II) chloride 2 mM
N.D.
+0.5
-0.4
-0.1
N.D.
stress
Phosphomycin 0.02 mg/ml
N.D.
-0.6
+0.4
+0.1
N.D.
phage
phage 93.1
N.D.
+0.5
-0.3
-0.1
N.D.
carbon source
succinate (C)
N.D.
-0.3
+0.6
+0.2
N.D.
nitrogen source
L-Isoleucine (N)
N.D.
+0.6
-0.1
-0.1
N.D.
pH
LB, pH10
N.D.
+1.0
+0.1
-0.5
N.D.
nitrogen source
Ammonium chloride (N)
N.D.
+1.0
-0.2
-0.1
N.D.
carbon source
L-Malic (C)
N.D.
+0.1
+0.6
+0.2
N.D.
stress
Cisplatin 0.005 mg/ml
N.D.
+0.6
+0.1
+0.1
N.D.
stress
Nickel (II) chloride 0.6 mM
N.D.
+0.8
-0.0
+0.1
N.D.
nitrogen source
L-tyrosine (N)
N.D.
+0.9
+0.2
-0.2
N.D.
stress
Sisomicin 0.0005 mg/ml
N.D.
+0.7
+0.1
+0.1
N.D.
nitrogen source
L-Threonine (N)
N.D.
+0.9
+0.1
+0.0
N.D.
stress
Nickel (II) chloride 0.6 mM
N.D.
+0.9
+0.1
+0.0
N.D.
nitrogen source
D-Alanine (N)
N.D.
+0.7
+0.5
-0.1
N.D.
carbon source
D-Lactate (C)
N.D.
+1.2
+0.1
+0.1
N.D.
stress
Cisplatin 0.0025 mg/ml
N.D.
+1.0
+0.2
+0.1
N.D.
nitrogen source
L-Alanine (N)
N.D.
+1.5
+0.4
+0.1
N.D.
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