Fitness for 5 genes in Acidovorax sp. GW101-3H11

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500 ntAc3H11_4262 and Ac3H11_4263 overlap by 4 nucleotidesAc3H11_4263 and Ac3H11_4264 are separated by 149 nucleotidesAc3H11_4264 and Ac3H11_4265 are separated by 107 nucleotidesAc3H11_4265 and Ac3H11_4266 are separated by 111 nucleotides Ac3H11_4262 - Protein YidD, at 36,702 to 37,001 _4262 Ac3H11_4263 - Inner membrane protein translocase component YidC, long form, at 36,998 to 38,710 _4263 Ac3H11_4264 - GTPase and tRNA-U34 5-formylation enzyme TrmE, at 38,860 to 40,299 _4264 Ac3H11_4265 - cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases, at 40,407 to 40,898 _4265 Ac3H11_4266 - FIG00931734: hypothetical protein, at 41,010 to 41,960 _4266
Group Condition Ac3H11_4262 Ac3H11_4263 Ac3H11_4264 Ac3H11_4265 Ac3H11_4266
carbon source D-Galactose (C) -0.1 N.D. -3.3 -0.2 -0.1
motility inner cut, R2A soft agar motility assay -0.7 N.D. -1.9 -0.2 -0.5
motility inner cut, R2A soft agar motility assay -0.2 N.D. -2.7 -0.2 -0.2
carbon source L-Arabinose (C) +0.1 N.D. -3.4 +0.1 -0.0
carbon source L-Arabinose (C) -0.2 N.D. -3.1 +0.0 -0.0
nitrogen source L-Isoleucine (N) +0.1 N.D. -3.2 -0.0 -0.1
carbon source D-Galactose (C) -0.0 N.D. -2.9 -0.1 -0.0
carbon source L-Arabinose (C) +0.2 N.D. -3.1 -0.2 +0.1
stress Zinc 1 mM +0.0 N.D. -2.5 -0.4 +0.0
motility inner cut, R2A soft agar motility assay +0.0 N.D. -3.0 +0.3 -0.3
stress Chlorite 0.1 mM +0.1 N.D. -2.5 -0.4 +0.0
nitrogen source Uridine (N) +0.3 N.D. -3.2 +0.2 -0.1
nitrogen source L-Histidine (N) -0.6 N.D. -2.0 +0.1 -0.3
carbon source D-Mannose (C) -0.0 N.D. -2.6 -0.3 +0.1
nitrogen source Ammonium chloride (N) +0.2 N.D. -2.8 -0.4 +0.2
stress Phosphomycin 0.06 mg/ml -0.3 N.D. -2.4 +0.3 -0.3
stress Paraquat dichloride 0.01 mg/ml +0.5 N.D. -2.8 -0.4 +0.0
nitrogen source L-Phenylalanine (N) +0.2 N.D. -2.7 -0.1 +0.1
nitrogen source D-Alanine (N) +0.8 N.D. -3.2 -0.4 +0.3
lb LB +0.3 N.D. -2.5 -0.2 +0.1
stress Cisplatin 0.0025 mg/ml +0.5 N.D. -2.1 -0.5 -0.1
lb LB +0.3 N.D. -2.6 +0.2 -0.1
stress Nickel (II) chloride 0.6 mM +0.3 N.D. -2.8 +0.4 -0.0
stress Sisomicin 0.001 mg/ml +0.5 N.D. -2.1 -0.6 +0.1
stress perchlorate 10 mM +0.3 N.D. -2.3 +0.1 -0.2
carbon source D-Lactate (C) +0.4 N.D. -2.3 +0.1 -0.2
stress Bacitracin 0.008 mg/ml +0.3 N.D. -2.2 -0.1 +0.2
stress Cisplatin 0.005 mg/ml +0.6 N.D. -2.2 -0.2 -0.0
pH LB, pH10 +1.4 N.D. -1.6 +0.2 +0.0
stress D-Cycloserine 0.05 mg/ml +0.3 N.D. +3.6 +0.1 +0.2
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