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Gene
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Cofit
Protein
Homologs
Fitness for 5 genes in
Acidovorax sp. GW101-3H11
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Ac3H11_4216 and Ac3H11_4217 are separated by 760 nucleotides
Ac3H11_4217 and Ac3H11_4218 are separated by 231 nucleotides
Ac3H11_4218 and Ac3H11_4219 are separated by 561 nucleotides
Ac3H11_4219 and Ac3H11_4220 are separated by 322 nucleotides
Ac3H11_4216 - hypothetical protein, at 484,931 to 485,224
_4216
Ac3H11_4217 - hypothetical protein, at 485,985 to 486,128
_4217
Ac3H11_4218 - Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4), at 486,360 to 488,768
_4218
Ac3H11_4219 - hypothetical protein, at 489,330 to 489,467
_4219
Ac3H11_4220 - hypothetical protein, at 489,790 to 489,918
_4220
Group
Condition
Ac3H11
_4216
Ac3H11
_4217
Ac3H11
_4218
Ac3H11
_4219
Ac3H11
_4220
stress
Cisplatin 0.005 mg/ml
-3.1
+0.3
+0.1
-0.1
-0.8
lb
LB
-0.6
-0.4
-0.0
-0.5
-0.7
stress
Chlorite 0.1 mM
-1.8
+0.0
-0.0
-0.5
+0.3
stress
Cobalt chloride 0.4 mM
-1.4
+0.0
+0.2
-0.6
-0.2
stress
Cobalt chloride 0.16 mM
-1.3
+0.2
+0.1
-0.1
-0.7
motility
inner cut, R2A soft agar motility assay
-1.3
+0.1
+0.0
-0.8
+0.3
carbon source
pyruvate (C)
-1.5
-0.3
+0.1
+0.1
+0.3
stress
sodium fluoride 25 mM
-1.0
-0.1
+0.0
+0.3
-0.6
carbon source
a-Ketoglutaric (C)
-0.8
+0.2
+0.3
-0.1
-0.8
stress
Bacitracin 0.008 mg/ml
-1.7
+0.1
-0.0
+0.2
+0.7
pH
LB, pH10
-2.3
+0.1
+0.5
+0.3
+0.6
stress
perchlorate 10 mM
-1.7
+0.5
-0.1
+0.3
+0.4
lb
LB
-1.2
+0.2
-0.0
+0.8
-0.1
stress
Nickel (II) chloride 0.6 mM
-1.2
-0.3
+0.1
+0.5
+0.6
stress
D-Cycloserine 0.05 mg/ml
+0.5
+0.4
+0.3
-0.1
-1.2
lb
LB
-1.4
+0.4
+0.2
+0.5
+0.3
carbon source
pyruvate (C)
-0.7
+0.6
+0.3
-0.3
+0.1
motility
inner cut, R2A soft agar motility assay
+0.6
-0.7
+0.4
-0.5
+0.7
nitrogen source
L-Alanine (N)
+1.2
-0.1
-0.0
-1.2
+0.7
nitrogen source
Ammonium chloride (N)
-1.6
+0.7
+0.2
-0.2
+1.9
motility
inner cut, R2A soft agar motility assay
-0.2
-0.3
+0.3
+1.2
+0.5
stress
2-Furfuraldehyde 0.06 vol%
+1.4
-0.3
+0.2
-0.1
+0.3
pH
LB, pH10
-0.5
-0.2
+0.3
-0.1
+2.1
stress
nitrate 100 mM
+0.4
-0.0
+0.4
+0.4
+0.7
carbon source
D-Mannose (C)
+0.4
+0.6
+0.3
+0.5
+0.5
carbon source
D-Lactate (C)
+0.4
+0.9
+0.4
+0.1
+0.7
carbon source
D-Lactate (C)
+0.2
+0.7
+0.4
+0.8
+0.3
carbon source
pyruvate (C)
+0.8
+0.5
+0.2
+0.7
+0.3
stress
copper (II) chloride 2 mM
+0.8
+0.7
-0.3
+0.5
+1.1
carbon source
succinate (C)
+2.4
+0.3
+0.1
+0.1
+0.3
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