Fitness for 5 genes in Acidovorax sp. GW101-3H11

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500 ntAc3H11_4192 and Ac3H11_4193 are separated by 682 nucleotidesAc3H11_4193 and Ac3H11_4194 are separated by 156 nucleotidesAc3H11_4194 and Ac3H11_4195 overlap by 38 nucleotidesAc3H11_4195 and Ac3H11_4196 are separated by 258 nucleotides Ac3H11_4192 - hypothetical protein, at 449,933 to 450,337 _4192 Ac3H11_4193 - DNA polymerase III alpha subunit (EC 2.7.7.7), at 451,020 to 454,256 _4193 Ac3H11_4194 - DNA polymerase-like protein PA0670, at 454,413 to 455,957 _4194 Ac3H11_4195 - RecA/RadA recombinase, at 455,920 to 456,783 _4195 Ac3H11_4196 - metal dependent phosphohydrolase, at 457,042 to 457,290 _4196
Group Condition Ac3H11_4192 Ac3H11_4193 Ac3H11_4194 Ac3H11_4195 Ac3H11_4196
stress Cisplatin 0.005 mg/ml +0.2 -3.8 -4.8 -2.9 +0.7
stress Cisplatin 0.0025 mg/ml -0.6 -1.9 -2.3 -1.6 -0.9
stress Sisomicin 0.001 mg/ml -0.2 +0.1 -4.8 +0.3 +0.1
nitrogen source L-Alanine (N) +0.4 +0.1 +0.0 +0.3 -5.1
motility inner cut, R2A soft agar motility assay +0.0 +0.1 -0.6 -1.1 -1.9
stress Chlorite 0.1 mM -0.6 -0.0 +0.6 +0.3 -2.6
stress Polymyxin B sulfate 0.0001 mg/ml -0.1 +0.2 -1.6 -0.0 -0.5
carbon source pyruvate (C) -0.2 +0.2 -1.6 +0.3 +0.2
stress nitrate 100 mM -0.5 -0.2 +0.2 +0.6 -1.2
stress copper (II) chloride 2 mM +0.0 -0.1 -1.1 +0.6 -0.4
stress 2-Furfuraldehyde 0.06 vol% -0.3 +0.0 -1.2 +0.2 +0.4
carbon source D-Gluconic Acid (C) -0.6 +0.2 +0.6 +0.5 -1.3
pH LB, pH10 +0.4 +0.2 +1.0 +0.1 -2.4
carbon source a-Ketoglutaric (C) -0.0 +0.4 -0.6 +0.4 -0.7
carbon source succinate (C) -0.1 +0.0 -1.2 +0.3 +0.6
carbon source D-Fructose (C) +0.2 +0.2 -1.1 +0.5 +0.1
nitrogen source L-Leucine (N) -0.3 +0.2 +1.5 -0.2 -1.3
pH LB, pH8 +0.4 +0.2 -1.1 +0.2 +0.4
carbon source succinate (C) -0.1 +0.1 -1.0 +0.3 +1.0
phage phage 93.2 +0.3 +0.2 +0.7 +0.1 -0.9
carbon source a-Ketoglutaric (C) +0.3 +0.1 +0.5 +0.4 -0.8
carbon source Glycerol (C) -0.2 +0.1 +0.2 +0.5 +1.1
carbon source D-Ribose (C) -0.1 +0.1 +1.1 +0.4 +0.3
stress syringaldehyde 2.5 mM -0.0 +0.2 +1.4 +0.6 -0.3
stress Cobalt chloride 0.4 mM -0.2 +0.1 -0.3 +1.2 +0.9
pH LB, pH5 +0.2 +0.2 +0.8 +0.5 +0.3
carbon source L-Arabinose (C) +0.2 +0.3 +0.4 +0.3 +0.9
lb LB -0.3 +0.1 +1.1 +0.3 +0.9
stress Nickel (II) chloride 0.8 mM +0.3 +0.2 +1.5 +0.3 +0.1
carbon source D-Gluconic Acid (C) -0.1 +0.3 +0.9 +1.4 +0.6
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