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Cofit
Protein
Homologs
Fitness for 5 genes in
Acidovorax sp. GW101-3H11
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Ac3H11_4060 and Ac3H11_4061 are separated by 94 nucleotides
Ac3H11_4061 and Ac3H11_4062 overlap by 4 nucleotides
Ac3H11_4062 and Ac3H11_4063 are separated by 120 nucleotides
Ac3H11_4063 and Ac3H11_4064 are separated by 850 nucleotides
Ac3H11_4060 - Cyanophycin synthase (EC 6.3.2.29)(EC 6.3.2.30), at 305,025 to 307,217
_4060
Ac3H11_4061 - Cyanophycin synthase (EC 6.3.2.29)(EC 6.3.2.30), at 307,312 to 309,891
_4061
Ac3H11_4062 - Conserved uncharacterized protein CreA, at 309,888 to 310,394
_4062
Ac3H11_4063 - 2-hydroxychromene-2-carboxylate isomerase/DsbA-like thioredoxin domain, at 310,515 to 311,162
_4063
Ac3H11_4064 - Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3), at 312,013 to 313,524
_4064
Group
Condition
Ac3H11
_4060
Ac3H11
_4061
Ac3H11
_4062
Ac3H11
_4063
Ac3H11
_4064
motility
inner cut, R2A soft agar motility assay
-2.0
-1.8
+0.2
-0.2
-0.2
motility
inner cut, R2A soft agar motility assay
-1.6
-1.9
-0.4
+0.2
-0.2
motility
inner cut, R2A soft agar motility assay
-1.7
-1.6
+0.0
+0.0
-0.2
nitrogen source
L-Leucine (N)
-1.2
-0.9
-0.3
-0.6
-0.6
nitrogen source
L-Isoleucine (N)
-1.0
-0.9
-0.6
-0.6
-0.1
carbon source
D-Galactose (C)
-1.1
-1.0
-0.3
-0.1
-0.2
carbon source
D-Mannose (C)
-1.1
-1.0
-0.2
-0.1
-0.2
stress
Bacitracin 0.008 mg/ml
+1.0
+0.9
-0.2
-0.1
-0.4
stress
Phosphomycin 0.06 mg/ml
+1.2
+1.2
-0.3
-0.3
-0.1
stress
Zinc 1 mM
+1.1
+1.2
-0.1
-0.3
-0.1
stress
Cisplatin 0.005 mg/ml
+1.0
+1.1
-0.3
-0.2
+0.0
stress
Sisomicin 0.001 mg/ml
+1.2
+1.2
-0.1
-0.4
-0.1
stress
nitrite 10 mM
+1.0
+1.1
-0.2
+0.1
-0.2
stress
Paraquat dichloride 0.01 mg/ml
+1.4
+1.3
-0.3
-0.2
-0.4
stress
copper (II) chloride 1 mM
+1.2
+1.0
-0.4
-0.1
+0.1
stress
Chlorite 0.1 mM
+1.3
+1.3
-0.1
-0.3
-0.2
stress
copper (II) chloride 1 mM
+1.1
+1.1
-0.0
+0.1
-0.3
stress
copper (II) chloride 2 mM
+1.3
+1.2
-0.1
-0.2
-0.1
stress
Cisplatin 0.0025 mg/ml
+1.2
+1.3
-0.5
+0.2
+0.1
lb
LB
+1.3
+1.4
-0.2
-0.1
-0.0
stress
sodium fluoride 35 mM
+1.5
+1.5
-0.2
-0.2
-0.2
stress
sodium fluoride 20 mM
+1.4
+1.5
-0.2
-0.1
-0.0
lb
LB
+1.9
+1.7
-0.2
-0.4
+0.0
stress
Cobalt chloride 0.32 mM
+1.5
+1.6
+0.1
-0.2
+0.1
stress
Sisomicin 0.0005 mg/ml
+1.7
+1.7
-0.0
-0.2
-0.0
stress
Nickel (II) chloride 0.6 mM
+1.5
+1.5
+0.3
+0.1
-0.2
stress
Polymyxin B sulfate 0.0001 mg/ml
+1.7
+1.8
+0.2
-0.2
-0.1
lb
LB
+2.0
+1.9
-0.2
-0.0
+0.1
stress
Nickel (II) chloride 0.6 mM
+1.9
+1.9
+0.1
+0.2
+0.1
stress
Cobalt chloride 0.16 mM
+2.0
+1.9
+0.0
+0.1
+0.2
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