Fitness for 5 genes in Acidovorax sp. GW101-3H11

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500 ntAc3H11_4054 and Ac3H11_4055 are separated by 4 nucleotidesAc3H11_4055 and Ac3H11_4056 are separated by 58 nucleotidesAc3H11_4056 and Ac3H11_4057 are separated by 83 nucleotidesAc3H11_4057 and Ac3H11_4058 are separated by 403 nucleotides Ac3H11_4054 - General secretion pathway protein F / Type II secretory pathway, component PulF, at 298,469 to 299,737 _4054 Ac3H11_4055 - 5'-nucleotidase (EC 3.1.3.5), at 299,742 to 300,677 _4055 Ac3H11_4056 - Probable calcium-binding signal peptide protein, at 300,736 to 301,095 _4056 Ac3H11_4057 - FIG00581394: hypothetical protein, at 301,179 to 301,556 _4057 Ac3H11_4058 - required for efflux of an amino acid polymer (from data), at 301,960 to 302,469 _4058
Group Condition Ac3H11_4054 Ac3H11_4055 Ac3H11_4056 Ac3H11_4057 Ac3H11_4058
carbon source D,L-Lactate (C) -3.8 -0.3 -0.5 -0.1 -0.5
carbon source pyruvate (C) -4.0 -0.2 -0.2 -0.5 -0.2
carbon source D-Glucose (C) -4.1 -0.2 -0.4 -0.4 +0.3
carbon source D-Gluconic Acid (C) -4.4 -0.1 -0.2 -0.0 -0.1
carbon source D-Mannose (C) -3.6 -0.1 -0.3 -0.0 -0.6
carbon source D-Glucose (C) -3.7 -0.4 -0.4 -0.3 +0.3
carbon source L-Lactate (C) -3.8 -0.1 -0.0 -0.2 -0.3
motility inner cut, R2A soft agar motility assay -1.8 -0.8 +0.5 +0.1 -2.5
carbon source D-Galactose (C) -2.7 -0.1 -0.2 -0.1 -1.1
carbon source L-Asparagine (C) -2.9 -0.1 -0.3 -0.1 -0.7
carbon source D-Gluconic Acid (C) -3.3 -0.2 -0.1 -0.3 -0.3
carbon source L-Lactate (C) -3.6 -0.2 +0.2 -0.2 -0.4
carbon source pyruvate (C) -3.3 +0.0 -0.4 -0.2 -0.4
carbon source Glycerol (C) -2.4 -0.4 -0.5 -0.2 -0.5
carbon source D-Fructose (C) -2.7 -0.2 -0.2 -0.1 -0.8
carbon source D-Lactate (C) -2.8 -0.3 -0.3 -0.1 -0.5
carbon source D-Lactate (C) -2.8 -0.1 -0.4 -0.2 -0.2
stress Nickel (II) chloride 0.8 mM -2.6 -0.2 -0.2 -0.1 -0.6
stress Tetracycline 0.0001 mg/ml -2.8 -0.5 -0.1 -0.2 -0.1
stress Dimethyl Sulfoxide 6 vol% -2.1 -0.2 -0.3 -0.2 -0.8
nitrogen source L-Histidine (N) -2.5 -0.2 -0.2 -0.3 -0.4
carbon source L-Arabinose (C) -3.0 -0.0 -0.4 -0.1 -0.1
stress Tetracycline 0.00005 mg/ml -2.7 -0.4 -0.3 -0.1 -0.2
carbon source D-Galactose (C) -2.7 -0.3 -0.3 +0.0 -0.3
carbon source D,L-Lactate (C) -2.6 -0.2 -0.3 -0.1 -0.4
motility inner cut, R2A soft agar motility assay -1.2 +0.5 -0.3 -0.2 -2.3
stress Polymyxin B sulfate 0.0001 mg/ml -5.4 -0.1 +0.1 -0.0 +1.9
stress Cisplatin 0.0025 mg/ml +1.1 +0.2 -0.8 +0.0 +1.2
pH LB, pH10 +5.4 -0.7 -0.5 -0.6 +1.1
pH LB, pH10 +5.3 -0.4 -0.3 -0.0 +0.9
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