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Protein
Homologs
Fitness for 5 genes in
Acidovorax sp. GW101-3H11
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Ac3H11_3957 and Ac3H11_3958 are separated by 64 nucleotides
Ac3H11_3958 and Ac3H11_3959 are separated by 44 nucleotides
Ac3H11_3959 and Ac3H11_3960 are separated by 149 nucleotides
Ac3H11_3960 and Ac3H11_3961 overlap by 105 nucleotides
Ac3H11_3957 - TRAP-type C4-dicarboxylate transport system, periplasmic component, at 181,639 to 182,628
_3957
Ac3H11_3958 - UDP-glucose 4-epimerase (EC 5.1.3.2), at 182,693 to 183,592
_3958
Ac3H11_3959 - Predicted D-glucarate or D-galactorate regulator, GntR family, at 183,637 to 184,365
_3959
Ac3H11_3960 - hypothetical protein, at 184,515 to 184,664
_3960
Ac3H11_3961 - Aldehyde dehydrogenase B (EC 1.2.1.22), at 184,560 to 186,098
_3961
Group
Condition
Ac3H11
_3957
Ac3H11
_3958
Ac3H11
_3959
Ac3H11
_3960
Ac3H11
_3961
nitrogen source
Ammonium chloride (N)
-0.7
-0.1
-1.9
N.D.
+0.2
stress
nitrite 10 mM
+0.1
-0.5
-1.7
N.D.
-0.2
pH
LB, pH10
+0.3
-0.5
-1.7
N.D.
-0.0
lb
LB
-0.3
-0.4
-1.2
N.D.
-0.2
stress
Cisplatin 0.0025 mg/ml
-0.2
+0.2
-1.4
N.D.
-0.6
carbon source
D-Glucose (C)
-0.1
-0.0
-1.8
N.D.
+0.1
stress
perchlorate 25 mM
-0.3
-0.1
-1.0
N.D.
-0.4
carbon source
D-Glucose (C)
-0.0
-0.2
-1.3
N.D.
-0.1
nitrogen source
L-Arginine (N)
-0.2
-0.3
-1.0
N.D.
-0.0
stress
Sisomicin 0.001 mg/ml
-0.2
-0.2
-1.2
N.D.
+0.1
stress
Chlorite 0.1 mM
-0.4
-0.1
-1.3
N.D.
+0.4
phage
phage 93.2
-0.0
+0.1
-1.1
N.D.
-0.2
stress
D-Cycloserine 0.05 mg/ml
+0.2
-0.3
-0.5
N.D.
-0.7
stress
Phosphomycin 0.02 mg/ml
-0.1
+0.1
-0.8
N.D.
-0.3
stress
Doxycycline hyclate 0.000025 mg/ml
-0.2
+0.1
-0.9
N.D.
-0.2
lb
LB
-0.1
+0.4
-0.9
N.D.
-0.4
nitrogen source
L-Serine (N)
+0.0
-0.0
-1.3
N.D.
+0.2
carbon source
succinate (C)
-0.3
+0.4
-0.9
N.D.
-0.3
motility
inner cut, R2A soft agar motility assay
+0.4
-0.5
-0.7
N.D.
-0.3
pH
LB, pH5
-0.0
-0.1
-1.1
N.D.
+0.1
stress
perchlorate 10 mM
+0.1
-0.1
-1.2
N.D.
+0.1
nitrogen source
L-Histidine (N)
-0.1
+0.2
-1.1
N.D.
-0.0
stress
A22 0.025 mg/ml
+0.2
-0.4
-1.0
N.D.
+0.3
nitrogen source
L-Threonine (N)
-0.0
+0.0
-1.2
N.D.
+0.3
stress
Bacitracin 0.032 mg/ml
+0.3
+0.0
-1.0
N.D.
-0.1
stress
Nickel (II) chloride 0.6 mM
+0.1
-0.1
-1.0
N.D.
+0.3
lb
LB
+0.2
+0.2
-0.8
N.D.
-0.2
stress
copper (II) chloride 2 mM
+0.3
-0.1
-1.0
N.D.
+0.3
nitrogen source
D-Alanine (N)
+0.2
+0.4
-1.1
N.D.
+0.0
motility
inner cut, R2A soft agar motility assay
+0.2
-0.4
-0.0
N.D.
+0.6
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