Fitness for 5 genes in Acidovorax sp. GW101-3H11

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500 ntAc3H11_3953 and Ac3H11_3954 are separated by 34 nucleotidesAc3H11_3954 and Ac3H11_3955 are separated by 6 nucleotidesAc3H11_3955 and Ac3H11_3956 are separated by 2 nucleotidesAc3H11_3956 and Ac3H11_3957 are separated by 88 nucleotides Ac3H11_3953 - D-galactarate dehydratase (EC 4.2.1.42), at 177,096 to 178,673 _3953 Ac3H11_3954 - hypothetical protein, not 6-phosphogluconolactonase, at 178,708 to 179,739 _3954 Ac3H11_3955 - TRAP-type C4-dicarboxylate transport system, large permease component, at 179,746 to 181,029 _3955 Ac3H11_3956 - TRAP-type C4-dicarboxylate transport system, small permease component, at 181,032 to 181,550 _3956 Ac3H11_3957 - TRAP-type C4-dicarboxylate transport system, periplasmic component, at 181,639 to 182,628 _3957
Group Condition Ac3H11_3953 Ac3H11_3954 Ac3H11_3955 Ac3H11_3956 Ac3H11_3957
pH LB, pH10 -0.3 -0.4 -0.9 -0.3 +0.3
carbon source L-Arabinose (C) -0.3 -0.3 -0.5 -0.3 -0.3
nitrogen source L-Leucine (N) +0.2 -0.5 -0.7 -0.7 +0.2
stress copper (II) chloride 2 mM +0.1 -0.1 -0.6 -1.2 +0.3
nitrogen source L-Histidine (N) -0.1 -0.4 -0.3 -0.4 -0.1
carbon source L-Malic (C) -0.1 -0.3 -0.3 -0.5 -0.1
stress copper (II) chloride 1 mM -0.1 -0.2 -0.2 -0.4 -0.3
nitrogen source Ammonium chloride (N) +0.4 -0.3 -0.5 -0.0 -0.7
lb LB -0.5 -0.2 +0.3 -0.8 +0.0
stress perchlorate 25 mM -0.1 +0.0 -0.2 -0.6 -0.3
stress Bacitracin 0.008 mg/ml +0.1 -0.4 +0.1 -0.5 -0.3
phage phage 93.1 +0.3 -0.3 -0.7 -0.1 +0.0
stress Cisplatin 0.0025 mg/ml +0.4 -0.0 -0.2 -0.8 -0.2
stress Chlorite 0.1 mM -0.3 +0.1 +0.5 -0.3 -0.4
motility inner cut, R2A soft agar motility assay +0.2 -0.1 -0.1 -0.7 +0.3
nitrogen source D-Alanine (N) -0.2 +0.2 -0.2 -0.4 +0.2
stress Paraquat dichloride 0.01 mg/ml -0.2 -0.9 -0.0 +0.7 +0.1
carbon source D-Gluconic Acid (C) -0.3 -0.1 -0.4 +0.5 -0.0
motility inner cut, R2A soft agar motility assay -0.1 -0.0 +0.3 -0.6 +0.2
lb LB -0.3 +0.3 +0.5 -0.4 -0.3
motility inner cut, R2A soft agar motility assay +0.3 -0.1 -0.8 +0.3 +0.4
stress nitrate 100 mM -0.2 +0.2 +0.4 -0.0 -0.4
pH LB, pH10 +0.4 +0.3 -0.6 +0.0 +0.1
stress syringaldehyde 2.5 mM -0.1 -0.2 +0.3 +0.4 +0.1
stress Cobalt chloride 0.32 mM +0.1 -0.4 +0.1 +0.1 +0.6
carbon source a-Ketoglutaric (C) +0.2 +0.6 -0.5 +0.4 -0.1
carbon source D-Lactate (C) -0.1 -0.0 +0.5 +0.5 +0.1
stress Cobalt chloride 0.4 mM +0.1 +0.2 +1.2 -0.2 -0.3
carbon source L-Lactate (C) +0.5 -0.1 +0.4 +0.3 -0.1
stress 2-Furfuraldehyde 0.06 vol% +0.2 -0.2 +0.8 +0.3 +0.2
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