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Protein
Homologs
Fitness for 5 genes in
Acidovorax sp. GW101-3H11
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Ac3H11_3923 and Ac3H11_3924 are separated by 176 nucleotides
Ac3H11_3924 and Ac3H11_3925 are separated by 186 nucleotides
Ac3H11_3925 and Ac3H11_3926 are separated by 21 nucleotides
Ac3H11_3926 and Ac3H11_3927 overlap by 39 nucleotides
Ac3H11_3923 - Transcriptional regulator, IclR family, at 140,377 to 141,177
_3923
Ac3H11_3924 - FIG00931629: hypothetical protein, at 141,354 to 141,575
_3924
Ac3H11_3925 - FIG00932626: hypothetical protein, at 141,762 to 142,196
_3925
Ac3H11_3926 - putative membrane protein, at 142,218 to 143,453
_3926
Ac3H11_3927 - hypothetical protein, at 143,415 to 143,540
_3927
Group
Condition
Ac3H11
_3923
Ac3H11
_3924
Ac3H11
_3925
Ac3H11
_3926
Ac3H11
_3927
lb
LB
-1.0
N.D.
-0.8
-3.4
N.D.
carbon source
L-Lactate (C)
-0.1
N.D.
-1.7
-2.7
N.D.
nitrogen source
Uridine (N)
+0.1
N.D.
-3.2
-1.4
N.D.
nitrogen source
Ammonium chloride (N)
-0.5
N.D.
-3.1
-0.5
N.D.
carbon source
D-Gluconic Acid (C)
-0.6
N.D.
-1.1
-2.3
N.D.
pH
LB, pH8
-0.3
N.D.
-0.8
-2.5
N.D.
stress
sodium fluoride 20 mM
-0.0
N.D.
-1.8
-1.6
N.D.
stress
Cobalt chloride 0.16 mM
-0.5
N.D.
-0.7
-2.3
N.D.
carbon source
pyruvate (C)
-0.2
N.D.
-1.8
-1.5
N.D.
stress
5-Hydroxymethylfurfural 5 mM
-0.0
N.D.
-2.2
-1.0
N.D.
carbon source
D-Glucose (C)
-0.1
N.D.
-2.2
-0.9
N.D.
stress
nitrite 10 mM
-0.4
N.D.
-0.8
-2.0
N.D.
carbon source
D-Gluconic Acid (C)
-0.3
N.D.
-0.9
-1.9
N.D.
carbon source
pyruvate (C)
-0.1
N.D.
-1.7
-1.4
N.D.
carbon source
D,L-Lactate (C)
-0.1
N.D.
-1.1
-1.9
N.D.
stress
A22 0.025 mg/ml
-0.3
N.D.
-2.6
-0.2
N.D.
stress
nitrite 10 mM
-0.6
N.D.
-2.5
+0.2
N.D.
stress
Chlorate 20 mM
-0.5
N.D.
-1.9
-0.6
N.D.
carbon source
Tween 20 (C)
-0.3
N.D.
-2.9
+0.2
N.D.
stress
2-Furfuraldehyde 0.06 vol%
-0.1
N.D.
-2.2
-0.6
N.D.
stress
Aluminum chloride 2 mM
-0.6
N.D.
-1.1
-1.2
N.D.
stress
Nickel (II) chloride 0.6 mM
-0.3
N.D.
-0.2
-2.1
N.D.
stress
perchlorate 10 mM
-0.4
N.D.
-2.3
+0.2
N.D.
carbon source
succinate (C)
-0.3
N.D.
+0.8
-1.9
N.D.
nitrogen source
L-Alanine (N)
+0.5
N.D.
+0.5
-1.7
N.D.
carbon source
succinate (C)
-0.5
N.D.
+1.2
-1.0
N.D.
pH
LB, pH10
-0.9
N.D.
+4.0
-2.6
N.D.
pH
LB, pH10
-1.2
N.D.
+4.2
-2.4
N.D.
stress
copper (II) chloride 2 mM
-0.2
N.D.
+2.9
-0.3
N.D.
stress
D-Cycloserine 0.05 mg/ml
-0.5
N.D.
+5.6
+0.5
N.D.
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Ac3H11_3925
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