Fitness for 5 genes in Acidovorax sp. GW101-3H11

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500 ntAc3H11_3886 and Ac3H11_3887 are separated by 30 nucleotidesAc3H11_3887 and Ac3H11_3888 are separated by 122 nucleotidesAc3H11_3888 and Ac3H11_3889 are separated by 64 nucleotidesAc3H11_3889 and Ac3H11_3890 overlap by 4 nucleotides Ac3H11_3886 - Cytochrome oxidase biogenesis protein Surf1, facilitates heme A insertion, at 105,216 to 106,022 _3886 Ac3H11_3887 - Probable transmembrane protein, at 106,053 to 106,268 _3887 Ac3H11_3888 - Cytochrome c oxidase polypeptide III (EC 1.9.3.1), at 106,391 to 107,272 _3888 Ac3H11_3889 - Probable transmembrane protein, at 107,337 to 107,561 _3889 Ac3H11_3890 - Cytochrome oxidase biogenesis protein Cox11-CtaG, copper delivery to Cox1, at 107,558 to 108,196 _3890
Group Condition Ac3H11_3886 Ac3H11_3887 Ac3H11_3888 Ac3H11_3889 Ac3H11_3890
carbon source D-Glucose (C) -2.6 +0.0 -1.7 N.D. -2.1
carbon source pyruvate (C) -2.0 -0.5 -1.6 N.D. -2.0
carbon source D-Glucose (C) -1.6 -0.3 -1.6 N.D. -2.4
carbon source D-Gluconic Acid (C) -2.0 +0.0 -1.8 N.D. -1.7
carbon source pyruvate (C) -1.6 +0.2 -1.8 N.D. -1.7
nitrogen source Ammonium chloride (N) -1.1 +0.2 -1.3 N.D. -2.3
carbon source D-Gluconic Acid (C) -1.3 +0.3 -1.3 N.D. -1.8
carbon source D-Ribose (C) -1.6 +0.1 -1.0 N.D. -1.4
stress perchlorate 10 mM -2.6 -0.2 -0.5 N.D. -0.5
carbon source D-Ribose (C) -1.1 -0.0 -1.0 N.D. -1.4
stress A22 0.025 mg/ml -1.1 -0.6 -0.4 N.D. -0.8
nitrogen source L-Histidine (N) -1.0 -0.3 -0.7 N.D. -0.8
nitrogen source L-Arginine (N) -0.6 -0.4 -0.9 N.D. -0.7
stress syringaldehyde 2.5 mM -1.1 -0.1 -0.8 N.D. -0.6
carbon source D,L-Lactate (C) -1.3 -0.1 -0.4 N.D. -0.5
carbon source D-Fructose (C) -0.7 -0.2 -0.5 N.D. -0.8
nitrogen source L-Serine (N) -0.7 -0.2 -0.7 N.D. -0.6
carbon source a-Ketoglutaric (C) -0.7 -0.0 -0.4 N.D. -0.8
stress perchlorate 25 mM -1.1 -0.5 -0.2 N.D. -0.2
nitrogen source Uridine (N) -0.3 -0.4 -0.6 N.D. -0.6
carbon source D-Galactose (C) -0.7 -0.1 -0.4 N.D. -0.7
stress 2-Furfuraldehyde 0.06 vol% -0.6 -0.3 -0.3 N.D. -0.6
nitrogen source L-Alanine (N) -0.4 +0.4 -0.7 N.D. -1.0
carbon source L-Arabinose (C) -0.6 +0.1 -0.7 N.D. -0.5
stress D-Cycloserine 0.05 mg/ml +0.2 -1.3 -0.7 N.D. +0.2
carbon source a-Ketoglutaric (C) -0.5 +0.3 -0.7 N.D. -0.5
carbon source L-Arabinose (C) -0.5 +0.3 -0.4 N.D. -0.7
stress Sisomicin 0.001 mg/ml -1.6 +0.9 +0.0 N.D. -0.4
stress copper (II) chloride 2 mM +0.8 -0.2 -0.4 N.D. -0.5
pH LB, pH10 +0.8 +0.5 +0.3 N.D. +0.4
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