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Cofit
Protein
Homologs
Fitness for 5 genes in
Acidovorax sp. GW101-3H11
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Ac3H11_3838 and Ac3H11_3839 are separated by 166 nucleotides
Ac3H11_3839 and Ac3H11_3840 are separated by 50 nucleotides
Ac3H11_3840 and Ac3H11_3841 are separated by 73 nucleotides
Ac3H11_3841 and Ac3H11_3842 are separated by 150 nucleotides
Ac3H11_3838 - Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19), at 54,727 to 55,575
_3838
Ac3H11_3839 - 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11), at 55,742 to 56,623
_3839
Ac3H11_3840 - Pantoate--beta-alanine ligase (EC 6.3.2.1), at 56,674 to 57,519
_3840
Ac3H11_3841 - Beta-ketoadipate enol-lactone hydrolase (EC 3.1.1.24), at 57,593 to 58,315
_3841
Ac3H11_3842 - Large protein containing transglutaminase-like domain, at 58,466 to 61,963
_3842
Group
Condition
Ac3H11
_3838
Ac3H11
_3839
Ac3H11
_3840
Ac3H11
_3841
Ac3H11
_3842
nitrogen source
L-Histidine (N)
-5.5
-4.8
-1.1
-1.0
-0.1
nitrogen source
Ammonium chloride (N)
-2.4
-2.4
-1.9
-1.3
-0.1
carbon source
D-Glucose (C)
-4.1
-3.1
-0.7
+0.1
-0.2
carbon source
L-Arabinose (C)
-4.7
-2.6
-0.0
+0.1
-0.1
nitrogen source
L-Leucine (N)
-3.0
-1.7
-1.6
-0.4
-0.3
carbon source
D-Ribose (C)
-4.4
-2.2
-0.2
-0.1
-0.1
carbon source
D-Galactose (C)
-3.1
-2.8
-0.8
-0.4
+0.1
carbon source
D-Sorbitol (C)
-2.4
-3.4
-1.1
+0.2
+0.0
carbon source
L-Glutamine (C)
-2.1
-3.5
-0.6
-0.4
-0.1
carbon source
L-Arabinose (C)
-3.1
-2.6
-0.9
+0.1
-0.2
nitrogen source
L-Threonine (N)
-2.9
-1.7
-1.6
-0.4
-0.1
carbon source
D-Glucose (C)
-2.9
-3.0
-0.3
-0.4
+0.0
nitrogen source
L-Proline (N)
-1.6
-3.7
-1.1
+0.0
-0.0
carbon source
D-Fructose (C)
-2.3
-2.4
-0.9
-0.8
+0.0
carbon source
L-Arabinose (C)
-3.8
-2.3
-0.5
+0.1
-0.1
carbon source
D-Mannose (C)
-2.6
-2.6
-0.8
-0.4
+0.0
carbon source
D-Fructose (C)
-3.1
-2.1
-0.3
-0.4
+0.0
carbon source
D-Ribose (C)
-3.1
-2.0
+0.0
-0.7
-0.1
carbon source
D,L-Lactate (C)
-1.6
-2.3
-1.1
-0.7
-0.0
carbon source
D,L-Lactate (C)
-1.7
-2.5
-0.8
-0.3
-0.2
carbon source
L-Asparagine (C)
-2.4
-1.9
-0.8
-0.4
+0.0
carbon source
Tween 20 (C)
-1.5
-1.6
-1.6
-0.5
-0.1
carbon source
D-Fructose (C)
-2.6
-2.3
-0.5
+0.4
-0.1
carbon source
D-Galactose (C)
-2.4
-2.1
-0.8
+0.3
-0.0
carbon source
D-Galactose (C)
-3.2
-1.6
-0.4
+0.2
+0.1
carbon source
pyruvate (C)
-1.9
-1.5
-0.4
-0.6
-0.2
carbon source
Glycerol (C)
-2.9
-1.5
-0.1
+0.1
-0.0
nitrogen source
L-Glutamine (N)
-1.7
-2.7
-0.3
+0.5
-0.1
carbon source
D-Lactate (C)
-1.8
-2.5
+0.1
+0.2
-0.2
carbon source
D-Gluconic Acid (C)
-2.0
-0.9
-1.0
+0.6
-0.1
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