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Protein
Homologs
Fitness for 5 genes in
Acidovorax sp. GW101-3H11
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Ac3H11_3809 and Ac3H11_3810 are separated by 175 nucleotides
Ac3H11_3810 and Ac3H11_3811 are separated by 68 nucleotides
Ac3H11_3811 and Ac3H11_3812 are separated by 145 nucleotides
Ac3H11_3812 and Ac3H11_3813 are separated by 4 nucleotides
Ac3H11_3809 - tungsten-containing formate dehydrogenase beta subunit, at 23,704 to 25,611
_3809
Ac3H11_3810 - Transcriptional regulator, TetR family, at 25,787 to 26,407
_3810
Ac3H11_3811 - putative membrane protein, at 26,476 to 26,883
_3811
Ac3H11_3812 - Hydrogen peroxide-inducible genes activator, at 27,029 to 27,991
_3812
Ac3H11_3813 - FIG074102: hypothetical protein, at 27,996 to 29,054
_3813
Group
Condition
Ac3H11
_3809
Ac3H11
_3810
Ac3H11
_3811
Ac3H11
_3812
Ac3H11
_3813
stress
Cisplatin 0.005 mg/ml
+0.2
-3.2
-0.1
-0.6
-0.2
stress
Sisomicin 0.001 mg/ml
+0.2
-1.7
+0.0
-0.3
-0.2
stress
nitrate 100 mM
+0.4
-2.1
-0.5
+0.5
-0.1
stress
A22 0.025 mg/ml
+0.2
-1.6
-0.2
-0.2
+0.1
pH
LB, pH8
-0.0
-1.4
-0.0
-0.0
+0.1
lb
LB
+0.3
-1.6
-0.4
-0.1
+0.3
carbon source
D-Lactate (C)
-0.1
-1.4
+0.0
-0.1
+0.2
nitrogen source
L-Histidine (N)
-1.0
+0.9
+0.0
-1.1
-0.3
stress
Cisplatin 0.0025 mg/ml
+0.1
-1.4
-0.3
+0.2
-0.0
nitrogen source
Uridine (N)
-0.2
-0.6
-0.2
-0.2
-0.1
motility
inner cut, R2A soft agar motility assay
+0.2
-2.0
+0.2
+0.3
-0.2
stress
perchlorate 10 mM
+0.3
-0.4
-0.6
-0.2
-0.3
carbon source
L-Lactate (C)
+0.0
-1.3
+0.0
+0.1
+0.2
stress
nitrite 10 mM
+0.2
-1.0
-0.1
-0.0
-0.1
carbon source
L-Malic (C)
-0.1
-0.7
+0.1
+0.1
-0.2
carbon source
pyruvate (C)
-0.2
-0.6
-0.3
+0.3
+0.0
stress
Sisomicin 0.0005 mg/ml
+0.1
-1.0
+0.2
+0.1
-0.1
stress
Cephalothin 0.025 mg/ml
+0.1
-0.5
-0.3
+0.2
-0.2
stress
perchlorate 25 mM
+0.2
-1.1
+0.1
+0.2
+0.1
motility
inner cut, R2A soft agar motility assay
-0.0
-0.8
+0.2
+0.2
+0.2
nitrogen source
L-Arginine (N)
-0.1
+0.7
-0.2
-0.2
-0.3
pH
LB, pH9
-0.0
+0.9
-0.2
-0.2
-0.1
lb
LB
+0.1
+0.9
-0.3
+0.4
-0.1
carbon source
D-Ribose (C)
-0.0
+1.3
-0.3
+0.1
+0.0
stress
Nickel (II) chloride 0.6 mM
+0.1
+1.0
-0.0
+0.2
-0.0
stress
5-Hydroxymethylfurfural 5 mM
+0.0
+1.1
+0.0
+0.1
+0.0
carbon source
D-Mannose (C)
-0.0
+0.9
+0.3
+0.1
+0.1
nitrogen source
L-Threonine (N)
+0.0
+1.6
-0.0
+0.2
-0.0
stress
Chlorite 0.1 mM
+0.3
+0.9
-0.1
+0.6
+0.1
stress
Paraquat dichloride 0.01 mg/ml
+0.0
+1.8
-0.1
+0.4
-0.2
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