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Cofit
Protein
Homologs
Fitness for 5 genes in
Acidovorax sp. GW101-3H11
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Ac3H11_3785 and Ac3H11_3786 are separated by 41 nucleotides
Ac3H11_3786 and Ac3H11_3787 are separated by 3 nucleotides
Ac3H11_3787 and Ac3H11_3788 are separated by 14 nucleotides
Ac3H11_3788 and Ac3H11_3789 overlap by 4 nucleotides
Ac3H11_3785 - Nucleoside-diphosphate-sugar epimerases, at 31,625 to 32,608
_3785
Ac3H11_3786 - hypothetical protein, at 32,650 to 32,916
_3786
Ac3H11_3787 - 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases / CDP-6-deoxy-delta-3,4-glucoseen reductase-like, at 32,920 to 33,972
_3787
Ac3H11_3788 - C4-dicarboxylate transport sensor protein dctS (EC 2.7.3.-), at 33,987 to 36,191
_3788
Ac3H11_3789 - two component transcriptional regulator, LuxR family, at 36,188 to 36,877
_3789
Group
Condition
Ac3H11
_3785
Ac3H11
_3786
Ac3H11
_3787
Ac3H11
_3788
Ac3H11
_3789
stress
Chloramphenicol 0.001 mg/ml
-0.1
-0.4
-2.6
-0.2
-0.4
nitrogen source
L-Phenylalanine (N)
-0.0
-0.1
-3.3
+0.1
-0.0
stress
Chloramphenicol 0.0005 mg/ml
-0.0
-0.5
-2.2
-0.0
-0.4
motility
inner cut, R2A soft agar motility assay
-0.8
-0.5
-0.4
-0.2
-0.9
stress
nitrite 10 mM
-0.6
+1.2
+1.2
+0.0
-0.5
stress
Bacitracin 0.032 mg/ml
-0.5
+0.5
+1.5
+0.2
-0.2
stress
Bacitracin 0.016 mg/ml
-0.3
+0.4
+1.5
+0.0
-0.2
stress
Phosphomycin 0.02 mg/ml
-0.5
+0.8
+1.5
-0.0
+0.1
stress
Bacitracin 0.008 mg/ml
-0.3
+0.9
+1.6
+0.1
-0.3
lb
LB
+0.0
+0.7
+1.6
-0.2
-0.2
stress
A22 0.025 mg/ml
-0.0
+0.6
+1.5
+0.1
+0.0
stress
Cobalt chloride 0.32 mM
-0.1
+0.6
+1.3
+0.2
+0.2
stress
copper (II) chloride 1 mM
-0.5
+1.1
+1.9
-0.0
-0.2
stress
Nickel (II) chloride 0.6 mM
-0.3
+0.6
+1.2
-0.0
+0.7
stress
Zinc 1 mM
-0.4
+1.1
+2.1
+0.1
-0.5
stress
Cisplatin 0.005 mg/ml
+0.2
+0.7
+1.2
+0.1
+0.1
stress
Fusidic 0.001 mg/ml
-0.1
+0.6
+2.0
-0.1
-0.1
stress
perchlorate 10 mM
-0.7
+1.0
+2.2
+0.2
-0.2
pH
LB, pH10
+0.1
+0.1
+2.3
+0.0
+0.1
stress
perchlorate 25 mM
-0.5
+1.0
+2.0
+0.2
+0.2
stress
Sisomicin 0.001 mg/ml
-0.2
+1.2
+1.9
+0.1
-0.1
lb
LB
-0.3
+1.0
+2.2
+0.0
+0.3
stress
Phosphomycin 0.06 mg/ml
-0.1
+1.0
+2.0
+0.5
-0.2
stress
Cisplatin 0.0025 mg/ml
-0.1
+0.9
+1.8
+0.3
+0.4
lb
LB
-0.0
+0.9
+2.0
+0.0
+0.4
stress
Chlorite 0.1 mM
+0.0
+0.7
+2.2
+0.1
+0.4
stress
D-Cycloserine 0.05 mg/ml
+4.5
-0.4
-1.0
+0.0
+0.4
pH
LB, pH10
-0.1
+0.6
+2.7
-0.1
+0.5
stress
copper (II) chloride 2 mM
-0.6
+1.2
+2.7
+0.5
+0.3
stress
Paraquat dichloride 0.01 mg/ml
-0.0
+1.1
+2.5
+0.2
+0.5
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