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Cofit
Protein
Homologs
Fitness for 5 genes in
Acidovorax sp. GW101-3H11
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Ac3H11_3782 and Ac3H11_3783 are separated by 43 nucleotides
Ac3H11_3783 and Ac3H11_3784 are separated by 194 nucleotides
Ac3H11_3784 and Ac3H11_3785 overlap by 13 nucleotides
Ac3H11_3785 and Ac3H11_3786 are separated by 41 nucleotides
Ac3H11_3782 - hypothetical protein, at 30,486 to 30,686
_3782
Ac3H11_3783 - Phage protein, at 30,730 to 31,311
_3783
Ac3H11_3784 - hypothetical protein, at 31,506 to 31,637
_3784
Ac3H11_3785 - Nucleoside-diphosphate-sugar epimerases, at 31,625 to 32,608
_3785
Ac3H11_3786 - hypothetical protein, at 32,650 to 32,916
_3786
Group
Condition
Ac3H11
_3782
Ac3H11
_3783
Ac3H11
_3784
Ac3H11
_3785
Ac3H11
_3786
nitrogen source
Ammonium chloride (N)
-0.0
-1.1
N.D.
-0.6
+0.0
motility
inner cut, R2A soft agar motility assay
-0.2
+0.3
N.D.
-0.8
-0.5
carbon source
D-Lactate (C)
-0.2
-0.6
N.D.
-0.1
-0.2
stress
copper (II) chloride 2 mM
-1.3
+0.2
N.D.
-0.6
+1.2
stress
copper (II) chloride 1 mM
-0.7
-0.4
N.D.
-0.5
+1.1
nitrogen source
L-Isoleucine (N)
-0.2
+0.3
N.D.
-0.4
-0.1
nitrogen source
L-Threonine (N)
+0.2
-0.1
N.D.
-0.7
+0.3
stress
Bacitracin 0.032 mg/ml
-0.5
+0.2
N.D.
-0.5
+0.5
stress
A22 0.025 mg/ml
-0.5
-0.4
N.D.
-0.0
+0.6
nitrogen source
L-Leucine (N)
-0.3
+0.2
N.D.
-0.5
+0.4
stress
Fusidic 0.001 mg/ml
-0.4
-0.2
N.D.
-0.1
+0.6
stress
Chlorite 0.1 mM
-0.8
-0.0
N.D.
+0.0
+0.7
stress
perchlorate 25 mM
-0.2
-0.3
N.D.
-0.5
+1.0
stress
Cisplatin 0.005 mg/ml
-0.4
-0.5
N.D.
+0.2
+0.7
lb
LB
-0.5
-0.1
N.D.
-0.3
+1.0
stress
Sisomicin 0.001 mg/ml
-0.7
-0.2
N.D.
-0.2
+1.2
stress
Phosphomycin 0.02 mg/ml
+0.1
-0.3
N.D.
-0.5
+0.8
stress
Chloramphenicol 0.001 mg/ml
+0.4
+0.2
N.D.
-0.1
-0.4
nitrogen source
L-tyrosine (N)
+0.3
-0.3
N.D.
-0.3
+0.4
stress
nitrite 10 mM
-0.2
-0.2
N.D.
-0.6
+1.2
stress
perchlorate 10 mM
+0.3
-0.2
N.D.
-0.7
+1.0
lb
LB
-0.4
+0.1
N.D.
+0.0
+0.7
lb
LB
-0.2
-0.1
N.D.
-0.0
+0.9
stress
Zinc 1 mM
+0.3
-0.4
N.D.
-0.4
+1.1
pH
LB, pH10
-0.1
+0.2
N.D.
-0.1
+0.6
stress
Bacitracin 0.008 mg/ml
+0.1
+0.3
N.D.
-0.3
+0.9
stress
Paraquat dichloride 0.01 mg/ml
-0.4
+0.5
N.D.
-0.0
+1.1
stress
Cisplatin 0.0025 mg/ml
+0.2
+0.3
N.D.
-0.1
+0.9
stress
Phosphomycin 0.06 mg/ml
+0.7
+0.2
N.D.
-0.1
+1.0
stress
D-Cycloserine 0.05 mg/ml
+0.5
+0.1
N.D.
+4.5
-0.4
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