Fitness for 5 genes in Acidovorax sp. GW101-3H11

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500 ntAc3H11_3725 and Ac3H11_3726 are separated by 193 nucleotidesAc3H11_3726 and Ac3H11_3727 are separated by 86 nucleotidesAc3H11_3727 and Ac3H11_3728 are separated by 29 nucleotidesAc3H11_3728 and Ac3H11_3729 overlap by 4 nucleotides Ac3H11_3725 - ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component, at 85,327 to 86,169 _3725 Ac3H11_3726 - Hydroxymethylpyrimidine ABC transporter, substrate-binding component, at 86,363 to 87,361 _3726 Ac3H11_3727 - Creatinine amidohydrolase (EC 3.5.2.10), at 87,448 to 88,311 _3727 Ac3H11_3728 - Bona fide RidA/YjgF/TdcF/RutC subgroup, at 88,341 to 88,805 _3728 Ac3H11_3729 - Cytosine deaminase (EC 3.5.4.1), at 88,802 to 90,130 _3729
Group Condition Ac3H11_3725 Ac3H11_3726 Ac3H11_3727 Ac3H11_3728 Ac3H11_3729
nitrogen source L-Alanine (N) N.D. -0.1 -1.0 -0.6 -3.6
pH LB, pH10 N.D. +0.1 -1.0 -0.6 -2.4
stress Bacitracin 0.008 mg/ml N.D. -0.4 -0.2 -0.3 -1.7
phage phage 93.2 N.D. -0.2 +0.2 -0.2 -2.1
lb LB N.D. +0.2 -0.1 -0.4 -2.0
nitrogen source L-Glutamine (N) N.D. -0.2 -0.1 -0.6 -1.2
stress copper (II) chloride 1 mM N.D. +0.1 -0.4 -0.2 -1.6
stress Nickel (II) chloride 0.6 mM N.D. -0.0 -0.4 -0.1 -1.4
nitrogen source L-Isoleucine (N) N.D. -0.1 -0.0 -0.2 -1.6
lb LB N.D. -0.3 -1.0 -0.7 +0.1
stress Cisplatin 0.0025 mg/ml N.D. +0.2 -0.2 -0.1 -1.7
carbon source D-Galactose (C) N.D. +0.3 -0.1 -0.3 -1.7
nitrogen source L-Serine (N) N.D. -0.0 -0.4 -0.7 -0.6
stress Chlorate 20 mM N.D. -0.0 -0.0 -0.2 -1.4
nitrogen source D-Alanine (N) N.D. +0.5 -0.5 -0.7 -0.6
nitrogen source Ammonium chloride (N) N.D. -0.1 -0.2 -1.1 +0.3
carbon source D-Glucose (C) N.D. -0.1 +0.4 +0.4 -1.4
stress sodium fluoride 20 mM N.D. -0.0 -0.4 +0.4 -0.7
motility inner cut, R2A soft agar motility assay N.D. +0.3 -0.8 -0.8 +0.7
nitrogen source Uridine (N) N.D. +0.0 -0.6 -0.4 +0.5
stress Chlorite 0.1 mM N.D. +0.2 -0.8 -0.7 +1.5
carbon source a-Ketoglutaric (C) N.D. -0.2 +0.3 +0.6 -0.4
lb LB N.D. -0.1 +0.5 -0.5 +0.5
nitrogen source L-Arginine (N) N.D. +0.4 +0.3 -0.7 +0.5
lb LB N.D. +0.1 -0.3 -0.1 +1.2
motility inner cut, R2A soft agar motility assay N.D. +0.9 +0.4 +0.3 -0.2
pH LB, pH10 N.D. +0.2 -0.3 +0.3 +1.2
lb LB N.D. +0.2 -0.0 +0.0 +1.5
stress nitrate 100 mM N.D. +0.4 -0.0 -0.4 +1.9
stress Doxycycline hyclate 0.000025 mg/ml N.D. +0.1 +0.5 +0.2 +1.1
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Ac3H11_3725
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Ac3H11_3729
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